Chromosomal Abnormalities

The NIGMS Repository holds a collection of samples with many types of chromosomal abnormalities. Karyotypes of the samples in this collection have been characterized by the sample submitter, and independently verified by cytogeneticists at the Coriell Institute. Additionally, many chromosomal abnormality samples have been analyzed on the Affymetrix Genome-Wide Human SNP Array 6.0 platform.


NIGMS Repository samples with Chromosomal Abnormalities

Click below on the chromosome of interest to view the UCSC Genome Browser with a track showing NCBI RefSeq Gene predictions and a track showing NIGMS Repository samples bearing copy number variants (CNVs) on that chromosome. Users can modify the display and search terms directly within the UCSC Genome Browser, and select the desired display mode for "Coriell CNVs" under "Phenotype and Disease Associations".

Click the chromosomes below to see samples from individuals with aberrations on the respective chromosome.

chromosome 1chromosome 2chromosome 3chromosome 4chromosome 5chromosome 6chromosome 7chromosome 8chromosome 9chromosome 10chromosome 11chromosome 12
chromosome 13chromosome 14chromosome 15chromosome 16chromosome 17chromosome 18chromosome 18chromosome 20chromosome 21chromosome 22chromosome Xchromosome Y

Data on the NIGMS Repository Chromosomal Abnormalities samples that have been genotyped on the Affymetrix Genome-Wide Human SNP Array 6.0 may be downloaded here.


Types of Chromosomal Abnormalities represented by NIGMS Repository samples

Click each link below to see available samples and their karyotypes. On each karyotype page is a filter tool to display samples based on Chromosome # of the abnormality.