Genomics and Epigenomics

Genomics, Transcriptomics, and Epigenomics Services

  • Targeted deep sequencing for genotyping and mutation analysis
  • Targeted bisulfite amplicon sequencing for DNA methylation analysis at individual alleles
  • Reduced Representation Bisulfite Sequencing (RRBS) for genome-wide profiling of DNA methylation
  • 16S ribosomal DNA sequencing for microbiome analysis
  • Bulk and single-cell RNA-seq for gene expression analysis
  • Bulk and single-cell ATAC-seq for genome wide analysis of chromatin accessibility
  • ChIP-seq for genome-wide mapping of DNA-bound proteins and histone modifications

Instruments

  • Illumina MiSeq sequencer
  • Chromium 10x Genomics microfluidics platform for single-cell transcriptomics
  • Covaris S2 focused sonicator
  • Pyromark Q24 pyrosequencing platform
  • Applied Biosystems QuantStudio6 Flex real time PCR instrument
  • Agilent Bioanalyzer 2100
  • Qubit fluorometer
  • NanoDrop spectrophotometer
  • Invitrogen iBright CL1000 gel imager

     

Contacts:

Dr. Jaroslav Jelinek, 856-797-9739 Email

Dr. Woonbok Chung, 856-668-2086 Email