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NA27892 DNA from LCL

Description:

CEREBRAL CREATINE DEFICIENCY SYNDROME 2; CCDS2
GUANIDINOACETATE METHYLTRANSFERASE; GAMT

Affected:

Yes

Sex:

Male

Age:

3 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Quantity 25 µg
Quantitation Method Please see our FAQ
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source DNA from LCL
Race Asiatic Indian
Ethnicity Not Hispanic/Latino
Ethnicity Indian
Country of Origin INDIA
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks See Phenotypic Data tab.

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by LINE assay
 
Gene GAMT
Chromosomal Location 19p13.3
Allelic Variant 2 ;
Identified Mutation c.424_426delGAG (p.E142del)

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 3 YR
Sex Male
Age of Onset(If not a control) 21 MO
Age at Diagnosis(If not a control) 29 MO
Hispanic or Latino/Not Hispanic or Latino Not Hispanic/Latino
Racial Category Asiatic Indian
Country INDIA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  GAMT, C.424_426DELGAG, P.GLU142DEL IN EXON 4; SHOWN BY FOCUSED EXOME SEQUENCING
Zygosity:  Homozygous
Notes: VARIANT INHERITED FROM BOTH MOTHER AND FATHER
Other variants:  KCNQ2, C.2323A>G (P.ARG775GLY), HETEROZYGOUS VARIANT OF UNCERTAIN SIGNIFICANCE, INHERITED FROM FATHER; MCM6, C.1366G>A (P.VAL456MET), HETEROZYGOUS VARIANT OF UNCERTAIN SIGNIFICANCE (RS191517067)
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  21 MONTHS
Age at Diagnosis:  29 MONTHS
In Utero History Information
Abnormal fetal heart rate or rhythm
Fetal growth issues
Advanced maternal age
Decreased fetal movement
Intrauterine growth restriction
Oligohydramnios
Polyhydramnios
Assisted reproduction
Additional Information:  No Data
Birth History Information
Low birth weight
Jaundice
Difficulty breathing
Abnormal serum screen
Failure to thrive
Positive newborn screen
Caesarian section
Neural tube defect
Meconium ileus
Gastroischisis
Premature delivery
Additional Information:  No Data
Dysmorphic Features
Strabismus
Coarse facies
Short philtrum
Wide mouth
Cleft lip
Cleft palate
Cupped ears
Thick fleshy lips
Widely-spaced teeth
Tented cupid
Fetal pads
Simian crease
Abnormal hands or feet
Hypertelorism
Hypotelorism
Macrocephaly
Microcephaly
Holoprosencephaly
Additional Information:  PROMINENCE OF NASOPHARYNGEAL ADENOIDS INDENTS THE AIRWAY
Neurological Symptoms
Neuropathy:  No Data
Lissencephaly
Cerebral palsy
Corpus callosum abnormalities
Ataxia
Chorea
Dystonia
Hypertonia
Hypotonia
Seizures
Structural brain anomaly
Hydrocephalus
Sleep abnormalities
Polymicrogyria
Unstable gait
Dandy walker
White matter issues
Basal ganglia damage
Additional Information:  MRI SCAN REVEALED FOCAL BILATERALLY SYMMETRIC FOCI OF ALTERED SIGNAL & DIFFUSION RESTRICTION INVOLVING THE DORSAL PONS & MEDULLARY TEGMENTUM / CENTRAL TEGMENTAL TRACTS (MEDIAL LONGITUDINAL FASCICULUS); CEREBRAL DYSRHYTHMIA
Optical and Audiological Symptoms
Defective vision
Pupil abnormality
Cornea abnormality
Nystagmus
Optic disk palor
Optic nerve damage
Blindness
Deafness
Defective hearing
Blepharitis
Congenital exotropia
Alacrima
Additional Information:  EYE BLINKING
Musculoskeletal Symptoms
Acromelia
Rhizomelia
Club foot
Contractures
Scoliosis
Kyphosis
Skeletal dysplasia
Vertebral anomalies
Non-ambulatory
Additional Information:  No Data
Developmental Milestones
Delayed speech and language development
Global developmental delay
Delayed fine motor skills
Delayed gross motor skills
Abnormal height for age
Abnormal weight for age
Holding Head Up Without Assistance:  No Data
Sitting Without Assistance:  No Data
Walking Without Assistance:  No Data
Running:  No Data
Additional Information:  No Data
Gastrointestinal Symptoms
Hepatosplenomegaly
Pyloric stenosis
Hirschsprung
Bloating
Constipation
Gastrointestinal reflux
Eating difficulties
Cholecystectomy
Liver abnormalities
Pancreatitis
Esophageal atresia
Additional Information:  No Data
Genitourinary Symptoms
Kidney abnormalities
Abnormalities of the ureter
Abnormalities of the urethra
Polycystic kidneys
Renal agenesis
Urethral obstruction
Hydronephrosis
Megacystis
Urinary tract infection
Ovarian cancer
Cryptorchidism
Ambiguous genitalia
Additional Information:  No Data
Respiratory and Cardiovascular Symptoms
Hypoplastic left heart
Hypoplastic right heart
Coarctation of aorta
Atrial septal defect
AV canal defect
Tetralogy of fallot
Truncus arteriosus
Ebstein anomaly
Heart murmur
Poor circulation
Breathing irregularities
Pneumothorax
Diaphragmatic hernia
Asthma
Pulmonary valve atresia
Additional Information:  No Data
Cognitive and Behavioral Symptoms
Happy personality
Anxiety
Mood disorder
Behavioral problems
Autism spectrum disorder
Sensory processing disorder
Aggression
Memory loss
Sleep disturbances
Learning disability
Attention deficit hyperactivity disorder
Intellectual Disability:  No Data
Additional Information:  MULTIPLE EPISODES OF HEAD DROP (5-6 PER DAY) SINCE 1 MONTH; POOR UNDERSTANDING
Additional Information
Uncategorized Symptoms:  LICKS; MAKES ABNORMAL SOUNDS
Testing Performed
Neurological Testing:  MRI IMAGING; MR SPECTROSCOPY REVEALED SIGNIFICANT REDUCTION IN CREATININE LEVELS; EEG
Optical and Audiological Testing:  No Data
Musculoskeletal and Developmental Testing:  No Data
Respiratory and Cardiovascular Testing:  No Data
Cognitive and Behavioral Testing:  No Data
Metabolic, Hematologic, and Endocrinologic Testing:  AMINO ACID PLASMA UHPLC REVEALED NO SIGNIFICANT ABNORMALITY; GUANADINO COMPOUNDS IN PLASMA AND URINE REVEALED LOW LEVELS OF CREATINE AND ELEVATED GAA; URIC ACID SERUM; LFT-A; CALCIUM SERUM; CREATININE SERUM; UREA SERUM; ELECTROLYTES; CBP (COMPLETE BLOOD PICTURE)
Uncategorized Testing:  No Data
Treatments and Assistive Devices
Occupational therapy
Physical therapy
Speech therapy
Wheelchair or ambulation devices
Orthotics
Service animal
Hearing aid
Communication or learning devices
music therapy
horseback therapy
craniosacral therapy
glasses
Surgeries  No Data
Additional Testing:  No Data
Medications
 SABRIL; TAURINE; CREATINE MONOHYDRATE; METANUTRITION; SODIUM BENZOATE; ORNITHINE; TETRAFOL PLUS; RIVOTRIL; LEVIPIL; NEOPEPTINE; A-Z VITAMIN; ULTRA D3; ASPIRITO; CEFIXIME (FOR STOMACH ILLNESS)
Family History
 No Data
Remarks See Phenotypic Data tab.

External Links

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Gene Cards GAMT
Gene Ontology GO:0006601 creatine biosynthesis
GO:0006936 muscle contraction
GO:0008168 methyltransferase activity
GO:0016740 transferase activity
GO:0030731 guanidinoacetate N-methyltransferase activity
NCBI Gene Gene ID:2593
NCBI GTR 601240 GUANIDINOACETATE METHYLTRANSFERASE; GAMT
612736 CEREBRAL CREATINE DEFICIENCY SYNDROME 2; CCDS2
OMIM 601240 GUANIDINOACETATE METHYLTRANSFERASE; GAMT
612736 CEREBRAL CREATINE DEFICIENCY SYNDROME 2; CCDS2
Pricing
International/Commercial/For-profit:
$281.00USD
U.S. Academic/Non-profit/Government:
$139.00USD
Add to Cart
How to Order
  • Ordering Instructions
  • MTA / Assurance Form
  • Statement of Research Intent Form
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