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NA21148 DNA from LCL

Description:

XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP B; XPB
EXCISION-REPAIR, COMPLEMENTING DEFECTIVE, IN CHINESE HAMSTER, 3; ERCC3

Affected:

Yes

Sex:

Female

Age:

No Data

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Class Repair Defective and Chromosomal Instability Syndromes
Quantity 25 µg
Quantitation Method Please see our FAQ
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source DNA from LCL
Race White
Family Member 1
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Clinically affected; mild XP without Cockayne Syndrome; sun sensitivity; freckle-like pigmentation on sun exposed sites which developed in childhood; multiple basal cell carcinomas the first of which was diagnosed at age 28 years; ocular malignant melanoma at age 22 years (choroidal melanoma arising near the ciliary body and invading the iris of left eye requiring enucleation); retina was otherwise normal without pigmentary retinal degeneration; conjunctival pterygium, a vascularized mass requiring corneal grafting; progressive bilateral sensorineural deafness detected in childhood requiring hearing aids from age 17 years; normal intelligence, but difficult to access because of the hearing loss; normal stature; normal sexual development; affected sister; mother of three normal children; see GM21071 Fibroblast; donor subject is a compound heterozygote: the maternal allele has a substitution of C>T at nucleotide 1273 in exon 8 of the ERCC3 gene (c.1273C>T) resulting in an arginine at position 425 being converted to a stop codon [Arg425Ter (R425X)] and the paternal allele has a T>C change at nucleotide 296 in exon 3 (c.296T>C) resulting in phenylalanine at position 99 being converted to a serine [Phe99Ser (F99S)]

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin confirmed by LINE assay
 
Gene ERCC3
Chromosomal Location 2q21
Allelic Variant 1 R425X; XERODERMA PIGMENTOSUM, TYPE B
Identified Mutation ARG425TER
 
Gene ERCC3
Chromosomal Location 2q21
Allelic Variant 2 133510.0002; XERODERMA PIGMENTOSUM, TYPE B
Identified Mutation PHE99SER; Vermeulen et al. [Am. J. Hum. Genet. 54: 191-200 (1994)] demonstrated that the two brothers with atypical xeroderma pigmentosum reported by Scott et al. [J. Am. Acad. Derm. 29: 883-889 (1993)] represented XPB patients, by microneedle injection of the cloned ERCC3 repair gene and by cell hybridization. They identified a phe99-to-ser missense mutation in the ERCC3 protein.

Phenotypic Data

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Remarks Clinically affected; mild XP without Cockayne Syndrome; sun sensitivity; freckle-like pigmentation on sun exposed sites which developed in childhood; multiple basal cell carcinomas the first of which was diagnosed at age 28 years; ocular malignant melanoma at age 22 years (choroidal melanoma arising near the ciliary body and invading the iris of left eye requiring enucleation); retina was otherwise normal without pigmentary retinal degeneration; conjunctival pterygium, a vascularized mass requiring corneal grafting; progressive bilateral sensorineural deafness detected in childhood requiring hearing aids from age 17 years; normal intelligence, but difficult to access because of the hearing loss; normal stature; normal sexual development; affected sister; mother of three normal children; see GM21071 Fibroblast; donor subject is a compound heterozygote: the maternal allele has a substitution of C>T at nucleotide 1273 in exon 8 of the ERCC3 gene (c.1273C>T) resulting in an arginine at position 425 being converted to a stop codon [Arg425Ter (R425X)] and the paternal allele has a T>C change at nucleotide 296 in exon 3 (c.296T>C) resulting in phenylalanine at position 99 being converted to a serine [Phe99Ser (F99S)]

Publications

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Oh KS, Khan SG, Jaspers NG, Raams A, Ueda T, Lehmann A, Friedmann PS, Emmert S, Gratchev A, Lachlan K, Lucassan A, Baker CC, Kraemer KH, Phenotypic heterogeneity in the XPB DNA helicase gene (ERCC3): xeroderma pigmentosum without and with Cockayne syndrome HUMAN MUTATION27(11):1092-103 2006
PubMed ID: 16947863

External Links

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Gene Cards ERCC3
Gene Ontology GO:0003684 damaged DNA binding
GO:0004003 ATP-dependent DNA helicase activity
GO:0004386 helicase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0005634 nucleus
GO:0005675 transcription factor TFIIH complex
GO:0006265 DNA topological change
GO:0006283 transcription-coupled nucleotide-excision repair
GO:0006355 regulation of transcription, DNA-dependent
GO:0006366 transcription from Pol II promoter
GO:0006917 induction of apoptosis
GO:0007605 perception of sound
GO:0009307 DNA restriction
GO:0015668 type III site-specific deoxyribonuclease activity
GO:0016787 hydrolase activity
GO:0043138 3' to 5' DNA helicase activity
NCBI Gene Gene ID:2071
NCBI GTR 133510 EXCISION REPAIR, COMPLEMENTING DEFECTIVE, IN CHINESE HAMSTER, 3; ERCC3
610651 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP B; XPB
OMIM 133510 EXCISION REPAIR, COMPLEMENTING DEFECTIVE, IN CHINESE HAMSTER, 3; ERCC3
610651 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP B; XPB
Pricing
International/Commercial/For-profit:
$281.00USD
U.S. Academic/Non-profit/Government:
$139.00USD
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