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NA20215 DNA from LCL

Description:

LANGER MESOMELIC DYSPLASIA
SHORT STATURE HOMEOBOX; SHOX

Affected:

Yes

Sex:

Male

Age:

65 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Class Disorders of Connective Tissue, Muscle, and Bone
Quantity 25 µg
Quantitation Method Please see our FAQ
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Sample Source DNA from LCL
Race White
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Clinically affected; anthropometric measurements at age 65.3 years: height = 127.7 cm, height SD score = -7.2, upper to lower segment ratio = 1.8, upper to lower segment z-score = 30.3, arm span = 106.2 cm, arm span z-score = -9.2, right tibial length z-score = -8.0, right radial length z-score = -5.3, fourth metacarpal z-score = 0.9; high arched palate; normal fingernails; no scoliosis; mild increased carrying angle; severe mesomelia; marked ulnar hypoplasia; hypoplastic fibulae; severe Madelung wrist deformity; fused epiphyses; subject's parents reportedly had short stature (both 157 cm); sister affected with Leri-Weill dyschondrosteosis; donor subject is hemizygous or homozygous for a 1-bp insertion of a C, ins723C, in exon 6a of the SHOX gene resulting in a frameshift that replaces the carboxy terminus with 50 novel amino acids; subject has no wildtype SHOX exon 6a. Exon duplications or deletions were not ruled out, apart from the deletions detected by FISH with a SHOX cosmid.

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin confirmed by LINE assay
 
Gene SHOX
Chromosomal Location Xpter-p22.32
Allelic Variant 1 312865.0009; LANGER MESOMELIC DYSPLASIA
Identified Mutation 1-BP INS, 723C; In a man with Langer mesomelic dysplasia (249700), Zinn et al. (2002) found a hemizygous or homozygous insertion of a C (723insC) in a stretch of 6 C's in exon 6a of the SHOX gene. The insertion causes a frameshift that replaces the C terminus with 50 novel amino acids, deleting a putative SH3 binding site. Zinn et al. (2002) concluded that the SHOXa isoform is essential for normal skeletal development.

Phenotypic Data

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Remarks Clinically affected; anthropometric measurements at age 65.3 years: height = 127.7 cm, height SD score = -7.2, upper to lower segment ratio = 1.8, upper to lower segment z-score = 30.3, arm span = 106.2 cm, arm span z-score = -9.2, right tibial length z-score = -8.0, right radial length z-score = -5.3, fourth metacarpal z-score = 0.9; high arched palate; normal fingernails; no scoliosis; mild increased carrying angle; severe mesomelia; marked ulnar hypoplasia; hypoplastic fibulae; severe Madelung wrist deformity; fused epiphyses; subject's parents reportedly had short stature (both 157 cm); sister affected with Leri-Weill dyschondrosteosis; donor subject is hemizygous or homozygous for a 1-bp insertion of a C, ins723C, in exon 6a of the SHOX gene resulting in a frameshift that replaces the carboxy terminus with 50 novel amino acids; subject has no wildtype SHOX exon 6a. Exon duplications or deletions were not ruled out, apart from the deletions detected by FISH with a SHOX cosmid.

Publications

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Zinn AR, Wei F, Zhang L, Elder FF, Scott CI Jr, Marttila P, Ross JL, Complete SHOX deficiency causes Langer mesomelic dysplasia. Am J Med Genet110(2):158-63 2002
PubMed ID: 12116254

External Links

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dbSNP dbSNP ID: 15408
Gene Cards SHOX
Gene Ontology GO:0001501 skeletal development
GO:0003700 transcription factor activity
GO:0005634 nucleus
GO:0006355 regulation of transcription, DNA-dependent
GO:0006366 transcription from Pol II promoter
GO:0007275 development
NCBI Gene Gene ID:6473
NCBI GTR 249700 LANGER MESOMELIC DYSPLASIA; LMD
312865 SHORT STATURE HOMEOBOX; SHOX
OMIM 249700 LANGER MESOMELIC DYSPLASIA; LMD
312865 SHORT STATURE HOMEOBOX; SHOX
Omim Description DYSCHONDROSTEOSIS, HOMOZYGOUS
  LANGER TYPE MESOMELIC DWARFISM
  MESOMELIC DWARFISM OF THE HYPOPLASTIC ULNA, FIBULA AND MANDIBLE TYPE
Pricing
International/Commercial/For-profit:
$281.00USD
U.S. Academic/Non-profit/Government:
$139.00USD
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How to Order
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