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NA16084 DNA from LCL

Description:

CEROID LIPOFUSCINOSIS, NEURONAL 1, INFANTILE; CLN1
PALMITOYL-PROTEIN THIOESTERASE 1; PPT1

Affected:

Yes

Sex:

Male

Age:

4 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Lysosomal Storage Diseases
Class Disorders of the Nervous System
Quantity 25 µg
Quantitation Method Please see our FAQ
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source DNA from LCL
Race White
Ethnicity IRISH/WELSH/ENGLISH/GERMAN/NORWEGIAN
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks IBR-BD Registry #1652/UT11-01; cognitive/motor deterioration at 12 months; granular osmiophilic deposits (GROD); palmitoyl-protein thioesterase activity <0.2 pmoles/min/mg of protein (normal range, 1-3 pmoles/min/mg of protein); compound heterozygote; one allele carries an arg151-to-ter nonsense mutation resulting from a C-to-T substitution at nucleotide 451 [ARG151TER (R151X)] in exon 5 of the palmitoyl-protein thioesterase 1 (PPT1) gene; the second allele carries a his 39-to-gln missense mutation in exon 1 resulting from a T to-A transversion at nucleotide 117 [HIS39GLN (H39Q)]

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase,Glucose-6-Phosphate Dehydrogenase, and Lactate Dehydrogenase Isoenzyme Electrophoresis
 
palmitoyl-protein hydrolase According to the submitter, biochemical test results for this subject showed decreased enzyme activity. EC Number: 3.1.2.22; 6-20% activity.
 
Gene PPT1
Chromosomal Location 1p32
Allelic Variant 1 600722.0006; CEROID LIPOFUSCINOSIS, JUVENILE NEURONAL, WITH GRANULAR OSMIOPHILIC
Identified Mutation ARG151TER; In 7 of 22 disease chromosomes from 11 patients with the JNCL/GROD (600680) variant, Mitchison et al. (1998) found an arg151-to-ter (R151X) nonsense mutation. In each case it was found in compound heterozygous state with a missense mutation.

Phenotypic Data

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Remarks IBR-BD Registry #1652/UT11-01; cognitive/motor deterioration at 12 months; granular osmiophilic deposits (GROD); palmitoyl-protein thioesterase activity <0.2 pmoles/min/mg of protein (normal range, 1-3 pmoles/min/mg of protein); compound heterozygote; one allele carries an arg151-to-ter nonsense mutation resulting from a C-to-T substitution at nucleotide 451 [ARG151TER (R151X)] in exon 5 of the palmitoyl-protein thioesterase 1 (PPT1) gene; the second allele carries a his 39-to-gln missense mutation in exon 1 resulting from a T to-A transversion at nucleotide 117 [HIS39GLN (H39Q)]

Publications

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Das, A, Molecular genetics of palmitoyl-protein thioesterase deficiency in the U.S. J Clin Invest102(1998):361-370 1998
PubMed ID: 9664077

External Links

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dbSNP dbSNP ID: 20220
Gene Cards PPT1
Gene Ontology GO:0005764 lysosome
GO:0006464 protein modification
GO:0007399 neurogenesis
GO:0007601 visual perception
GO:0008474 palmitoyl-(protein) hydrolase activity
GO:0016787 hydrolase activity
NCBI Gene Gene ID:5538
NCBI GTR 256730 CEROID LIPOFUSCINOSIS, NEURONAL, 1; CLN1
600722 PALMITOYL-PROTEIN THIOESTERASE 1; PPT1
OMIM 256730 CEROID LIPOFUSCINOSIS, NEURONAL, 1; CLN1
600722 PALMITOYL-PROTEIN THIOESTERASE 1; PPT1
Omim Description CEROID LIPOFUSCINOSIS, NEURONAL 1, INFANTILE; CLN1
  INFANTILE NEURONAL CEROID LIPOFUSCINOSIS; INCL
  NEURONAL CEROID LIPOFUSCINOSIS, INFANTILE FINNISH TYPE; NCL
  SANTAVUORI DISEASE
  SANTAVUORI-HALTIA DISEASE
Pricing
International/Commercial/For-profit:
$281.00USD
U.S. Academic/Non-profit/Government:
$139.00USD
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