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NA09888 DNA from LCL

Description:

TRICHORHINOPHALANGEAL SYNDROME, TYPE II; TRPS2 (LANGER-GIEDION SYNDROME; LGS)
CHROMOSOME DELETION
COPY NUMBER VARIATION (CNV) REFERENCE PANEL

Affected:

Yes

Sex:

Female

Age:

8 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Images

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Chromosome Abnormalities
dbGaP
Class Disorders of Connective Tissue, Muscle, and Bone
Quantity 25 µg
Quantitation Method Please see our FAQ
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source DNA from LCL
Race White
Relation to Proband proband
Confirmation Clinical summary/Case history
ISCN 46,XX,del(8)(q23q24.1)[20]
Species Homo sapiens
Common Name Human
Remarks Facial asymmetry; multiple exostoses; sparse hair; speech problems; weight, height, and head circumference below the 3rd %ile; 46,XX,del(8)(pter>q23::q24.13>qter)

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase, Glucose-6-Phosphate Dehydrogenase, Lactate Dehydrogenase, and Malate Dehydrogenase Isoenzyme Electrophoresis and by Chromosome Analysis
 
CNVPANEL For more information click here:CNVPANEL01
 
Cytogenetics Chromosome 8: DELETION Aneuploid Segment (-)8q23>8q24
Chromosome 8: DELETION Aneuploid Segment (-)8q23-8q24

Phenotypic Data

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Remarks Facial asymmetry; multiple exostoses; sparse hair; speech problems; weight, height, and head circumference below the 3rd %ile; 46,XX,del(8)(pter>q23::q24.13>qter)

Publications

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Walters-Sen L, Neitzel D, Bristow SL, Mitchell A, Alouf CA, Aradhya S, Faulkner N, Experience analysing over 190,000 embryo trophectoderm biopsies using a novel FAST-SeqS preimplantation genetic testing assay Reproductive biomedicine online44:228-238 2021
PubMed ID: 35039224
 
Tang Z, Berlin DS, Toji L, Toruner GA, Beiswanger C, Kulkarni S, Martin CL, Emanuel BS, Christman M, Gerry NP, A dynamic database of microarray-characterized cell lines with various cytogenetic and genomic backgrounds G3 (Bethesda, Md)3:1143-9 2013
PubMed ID: 23665875
 
Hou J, Parrish J, Ludecke HJ, Sapru M, Wang Y, Chen W, Hill A, Siegel-Bartelt J, Northrup H, Elder FF, et al, A 4-megabase YAC contig that spans the Langer-Giedion syndrome region on human chromosome 8q24.1: use in refining the location of the trichorhinophalangeal syndrome and multiple exostoses genes (TRPS1 and EXT1). Genomics29:87-97 1995
PubMed ID: 8530105
 
Parrish JE, Wagner MJ, Hecht JT, Scott CI Jr, Wells DE, Molecular analysis of overlapping chromosomal deletions in patients with Langer-Giedion syndrome. Genomics11:54-61 1991
PubMed ID: 1684953

External Links

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dbSNP dbSNP ID: 11313
NCBI Gene Gene ID:3966
NCBI GTR 150230 TRICHORHINOPHALANGEAL SYNDROME, TYPE II; TRPS2
OMIM 150230 TRICHORHINOPHALANGEAL SYNDROME, TYPE II; TRPS2
Omim Description LANGER-GIEDION SYNDROME CHROMOSOME REGION; LGCR
  LANGER-GIEDION SYNDROME; LGS
  TRICHORHINOPHALANGEAL SYNDROME, TYPE II; TRPS2

Images

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View copy number variation 
copy number variation 
Pricing
International/Commercial/For-profit:
$281.00USD
U.S. Academic/Non-profit/Government:
$139.00USD
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How to Order
  • Ordering Instructions
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