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NA01676 DNA from Fibroblast

Description:

LOWE OCULOCEREBRORENAL SYNDROME; OCRL
OCRL GENE; OCRL

Affected:

Yes

Sex:

Male

Age:

10 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Class Ophthalmologic Disorders
Quantity 10 µg
Quantitation Method Please see our FAQ
Cell Type Fibroblast
Transformant Untransformed
Sample Source DNA from Fibroblast
Race White
Relation to Proband proband
Confirmation Clinical summary/Case history
Species Homo sapiens
Common Name Human
Remarks Positive family history; clinically affected; donor subject is hemizygous for a C>T transition at nucleotide 2479 in the OCRL gene (2479C>T)resulting in a premature stop at codon 827 [Arg827Ter (R827X)]

Characterizations

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PDL at Freeze 5.79
Passage Frozen 5
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase Isoenzyme Electrophoresis
 
Gene OCRL
Chromosomal Location Xq26.1
Allelic Variant 1 R827X; LOWE OCULOCEREBRORENAL SYNDROME
Identified Mutation ARG827TER

Phenotypic Data

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Remarks Positive family history; clinically affected; donor subject is hemizygous for a C>T transition at nucleotide 2479 in the OCRL gene (2479C>T)resulting in a premature stop at codon 827 [Arg827Ter (R827X)]

Publications

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Madhivanan K, Ramadesikan S, Hsieh WC, Aguilar MC, Hanna CB, Bacallao RL, Aguilar RC, Lowe syndrome patient cells display mTOR- and RhoGTPase-dependent phenotypes alleviated by rapamycin and statins Human molecular genetics: 2020
PubMed ID: 32391547
 
Luo N, West CC, Murga-Zamalloa CA, Sun L, Anderson RM, Wells CD, Weinreb RN, Travers JB, Khanna H, Sun Y, OCRL localizes to the primary cilium: a new role for cilia in Lowe syndrome Human molecular genetics21:3333-44 2012
PubMed ID: 22543976
 
Coon, B.G., Mukherjee, D., Hanna, C.B., Riese II, D.J., Lowe, M., and Aguilar, R.C., Lowe syndrome patient fibroblasts display Ocrl1-specific cell migration defects that cannot be rescued by the homologous Inpp5b phosphatase Hum Molec Genet18(23):4478-4491 2009
PubMed ID: 19700499
 
Allen PG, Actin filament uncapping localizes to ruffling lamellae and rocketing vesicles Nature cell biology5:972-9 2003
PubMed ID: 14557819
 
Harper GS, Hascall VC, Yanagishita M, Gahl WA, Proteoglycan synthesis in normal and Lowe syndrome fibroblasts. J Biol Chem262:5637-43 1987
PubMed ID: 3571227
 
Donnelly PV, Reed P, DiFerrante N, Synthesis and sulfation of glycosaminoglycans in fibroblasts from a patient with Lowe's syndrome. Connect Tissue Res13:89-98 1984
PubMed ID: 6242399

External Links

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dbSNP dbSNP ID: 20646
Gene Cards OCRL
Gene Ontology GO:0000139 Golgi membrane
GO:0004439 phosphoinositide 5-phosphatase activity
GO:0005795 Golgi stack
GO:0005798 Golgi vesicle
GO:0006629 lipid metabolism
GO:0016787 hydrolase activity
NCBI Gene Gene ID:4952
NCBI GTR 300535 OCRL INOSITOL POLYPHOSPHATE-5-PHOSPHATASE; OCRL
309000 LOWE OCULOCEREBRORENAL SYNDROME; OCRL
OMIM 300535 OCRL INOSITOL POLYPHOSPHATE-5-PHOSPHATASE; OCRL
309000 LOWE OCULOCEREBRORENAL SYNDROME; OCRL
Omim Description LOWE OCULOCEREBRORENAL SYNDROME; OCRL
  LOWE SYNDROME; LS
  OCRL1
Pricing
International/Commercial/For-profit:
$281.00USD
U.S. Academic/Non-profit/Government:
$139.00USD
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