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NA00897 DNA from LCL

Description:

CYSTIC FIBROSIS; CF
CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REGULATOR; CFTR

Affected:

Yes

Sex:

Male

Age:

13 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Class Other Disorders of Known Biochemistry
Quantity 25 µg
Quantitation Method Please see our FAQ
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source DNA from LCL
Race White
Family Member 1
Relation to Proband proband
Confirmation Molecular characterization after cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Mild; no pancreatic insufficiency; first diagnosed at age 4 months; a sib died of cystic fibrosis at age 10; see GM00768 Fibroblast; donor subject is a compound heterozygote: one allele carries the deltaF508 deletion mutation (Phe508DEL) and a second allele carries a C-to-G substitution at nucleotide 1172 (1172C>G) which converts the arg-347 codon (CGC) to a pro (CCC), resulting in a missense mutation in exon 7 in the CFTR gene [Arg347Pro (R347P)]

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase Isoenzyme Electrophoresis
 
CYSTIC FIBROSIS GENE: RFLP HAPLOTYPES & MUTATION STUDIES Heterozygous for the F508 deletion mutation (C. Goodpasture, VIVIGEN, Santa Fe, NM, personal communication).
 
Gene CFTR
Chromosomal Location 7q31.2
Allelic Variant 1 602421.0001; CYSTIC FIBROSIS
Identified Mutation PHE508DEL; Deletion of codon 508 (CTT) in exon 10 leads to deletion of phenylalanine-508 (delta-F508).
 
Gene CFTR
Chromosomal Location 7q31.2
Allelic Variant 2 602421.0006; CYSTIC FIBROSIS
Identified Mutation ARG347PRO; In a family identified as UT 1446, Dean et al. [Cell 61: 863-870 (1990)] found a C-to-G transversion at position 1172, resulting in substitution of proline for aspartic acid (R347P). The mutation destroyed an HhaI restriction site and created a NcoI site.

Phenotypic Data

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Remarks Mild; no pancreatic insufficiency; first diagnosed at age 4 months; a sib died of cystic fibrosis at age 10; see GM00768 Fibroblast; donor subject is a compound heterozygote: one allele carries the deltaF508 deletion mutation (Phe508DEL) and a second allele carries a C-to-G substitution at nucleotide 1172 (1172C>G) which converts the arg-347 codon (CGC) to a pro (CCC), resulting in a missense mutation in exon 7 in the CFTR gene [Arg347Pro (R347P)]

Publications

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Di Sant'Agnese PA, Talamo RD, Pathogenesis and physiopathology of cystic fibrosis of the pancreas Fibrocystic disease of the pancreas (Mucoviscidosis) The New England journal of medicine277:1399+ 1967
PubMed ID: 4866147

External Links

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dbSNP dbSNP ID: 10372
Gene Cards CFTR
Gene Ontology GO:0005216 ion channel activity
GO:0005224 ATP-binding and phosphorylation-dependent chloride channel activity
GO:0005260 channel-conductance-controlling ATPase activity
GO:0005515 protein binding
GO:0005524 ATP binding
GO:0005624 membrane fraction
GO:0005887 integral to plasma membrane
GO:0006811 ion transport
GO:0007585 respiratory gaseous exchange
GO:0016323 basolateral plasma membrane
GO:0016324 apical plasma membrane
GO:0030165 PDZ domain binding
GO:0042626 ATPase activity, coupled to transmembrane movement of substances
NCBI Gene Gene ID:1080
NCBI GTR 219700 CYSTIC FIBROSIS; CF
602421 CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REGULATOR; CFTR
OMIM 219700 CYSTIC FIBROSIS; CF
602421 CYSTIC FIBROSIS TRANSMEMBRANE CONDUCTANCE REGULATOR; CFTR
Omim Description CYSTIC FIBROSIS; CF
  MUCOVISCIDOSIS
Pricing
International/Commercial/For-profit:
$281.00USD
U.S. Academic/Non-profit/Government:
$139.00USD
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How to Order
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