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GM28600 iPSC from Fibroblast

Description:

FARBER LIPOGRANULOMATOSIS
N-ACYLSPHINGOSINE AMIDOHYDROLASE 1; ASAH1

Affected:

Yes

Sex:

Male

Age:

No Data

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Lysosomal Storage Diseases
Protocols Protocol PDF
Biopsy Source Skin
Cell Type Stem cell
Cell Subtype Induced pluripotent stem cell
Transformant Reprogrammed (Sendai)
Sample Source iPSC from Fibroblast
Race Other
Ethnicity TUNISIAN
Country of Origin USA
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
ISCN 46,XY[20]
Species Homo sapiens
Common Name Human
Remarks Cell line ID: TRNDi030-A (PMID: 34088014). Reprogrammed from parental fibroblast GM20015. Clinically affected; severe (classical) subtype; consanguineous parents; died at age 2; donor subject is homozygous for a A>G transition at nucleotide 107 in exon 2 of the ASAH gene [107A>G] resulting in a substitution of cysteine for tyrosine at codon 36 [Tyr36Cys(Y36C)] in the alpha subunit. Researchers purchasing hiPSCs from the NIGMS Repository are responsible for any limited use label licenses (LULLs) applicable to the cell line purchased. The applicable LULL to this line is Sendai-CytoTune.

Characterizations

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Passage Frozen 28
 
Induced Pluripotent Stem Cell The frozen cell line submitted to the Repository was recovered and expanded. The expanded line was evaluated for viability surface antigen expression and alkaline phosphatase activity. Pluripotency was assessed via embryoid body (EB) formation. Steady-state mRNA expression patterns of undifferentiated iPSC and EBs were determined via real-time PCR. Characterization data are included in the Certificate of Analysis.
 
Gene ASAH
Chromosomal Location 8p22
Allelic Variant 1 613468.0003; FARBER LIPOGRANULOMATOSIS
Identified Mutation TYR36CYS; In a male offspring of consanguineous Tunisian parents with the severe (classic) subtype of Farber lipogranulomatosis (Souillet et al., 1989), Bar et al. (2001) found a tyr36-to-cys (Y36C) mutation of the ASAH gene due to a 107A-G transition. The amino acid substitution was located in the alpha subunit.
 
Gene ASAH
Chromosomal Location 8p22
Allelic Variant 2 613468.0003; FARBER LIPOGRANULOMATOSIS
Identified Mutation TYR36CYS; In a male offspring of consanguineous Tunisian parents with the severe (classic) subtype of Farber lipogranulomatosis (Souillet et al., 1989), Bar et al. (2001) found a tyr36-to-cys (Y36C) mutation of the ASAH gene due to a 107A-G transition. The amino acid substitution was located in the alpha subunit.

Phenotypic Data

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Remarks Cell line ID: TRNDi030-A (PMID: 34088014). Reprogrammed from parental fibroblast GM20015. Clinically affected; severe (classical) subtype; consanguineous parents; died at age 2; donor subject is homozygous for a A>G transition at nucleotide 107 in exon 2 of the ASAH gene [107A>G] resulting in a substitution of cysteine for tyrosine at codon 36 [Tyr36Cys(Y36C)] in the alpha subunit. Researchers purchasing hiPSCs from the NIGMS Repository are responsible for any limited use label licenses (LULLs) applicable to the cell line purchased. The applicable LULL to this line is Sendai-CytoTune.

External Links

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Gene Cards ASAH
ASAH1
Gene Ontology GO:0005764 lysosome
GO:0006631 fatty acid metabolism
GO:0006672 ceramide metabolism
GO:0016787 hydrolase activity
GO:0017040 ceramidase activity
NCBI Gene Gene ID:427
NCBI GTR 228000 FARBER LIPOGRANULOMATOSIS; FRBRL
613468 N-ACYLSPHINGOSINE AMIDOHYDROLASE 1; ASAH1
OMIM 228000 FARBER LIPOGRANULOMATOSIS; FRBRL
613468 N-ACYLSPHINGOSINE AMIDOHYDROLASE 1; ASAH1
Omim Description AC DEFICIENCY
  ACID CERAMIDASE DEFICIENCY
  CERAMIDASE DEFICIENCY
  FARBER LIPOGRANULOMATOSIS
  N-LAURYLSPHINGOSINE DEACYLASE DEFICIENCYN-ACYLSPHINGOSINE AMIDOHYDROLASE, INCLUDED; ASAH, INCLUDED

Culture Protocols

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Passage Frozen 28
Split Ratio 1:8
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium mTeSR1
Serum none
Substrate Matrigel
Supplement -
Pricing
Commercial/For-profit:
$1,789.00USD
Academic/Non-profit/Government:
$1,110.00USD
Add to Cart
How to Order
  • Ordering Instructions
  • MTA / Assurance Form
  • Statement of Research Intent Form
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Same Subject
  • GM20015 - Fibroblast
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