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GM26636 Fibroblast

Description:

VICI SYNDROME; VICIS
ECTOPIC P-GRANULES AUTOPHAGY PROTEIN 5, C. ELEGANS, HOMOLOG OF; EPG5

Affected:

Yes

Sex:

Male

Age:

8 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
PIGI Consented Sample
Cell Type Fibroblast
Tissue Type Skin
Transformant Untransformed
Race White
Ethnicity Not Hispanic/Latino
Ethnicity Ashkenazi Jewish
Country of Origin USA
Family Member 1
Family History N
Relation to Proband proband
ISCN 46,XY[24].arr[hg19] 4q12(57,053,403-58,256,363)x3
Species Homo sapiens
Common Name Human
Remarks Clinically affected; symptom onset began at 3 months; mother noted decreased movement towards end of pregnancy; mother was on enoxaparin during pregnancy; at 3 months of age, MRI showed multiple lesions including pontocerebellar hyperplasia, asgenesis of corpus callosum, and decreased myelination, failure to thrive; facial dysmorphism; symptoms include seizures, brain abnormalities including agenesis of the corpus callosum, cataracts, optic atrophy, chronic lung disease, mild hypertrophic cardiomyopathy, severe myopathy/hypotonia, GI dysmotility with G-tube, multiple pneumonias, urosepsis, obstructive sleep apnea, unable to follow verbal commands (this milestone has since been achieved); normal karyotype, WES GeneDx; genetic testing revealed a homozygous recessive mutation in the EPG5 gene: c.1007A>G (p.Q336R); treatments: G-tube, Nissan fundoplication, physical therapy, speech therapy, occupational therapy; assisted devices: wheelchair, orthotics, communication/learning device; no family history of the disease; parents are non-consanguineous; PubMed ID# 26917586, 27343256, 27343258; same subject as GM26249 (lymph)and GM27291 (stem cell); unaffected carrier mother is GM26251 (Lymph); unaffected carrier father is GM26250 (Lymph) and GM27894 (fibro); unaffected sister is GM27895 (fibro).

Characterizations

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PDL at Freeze 2.82
Passage Frozen 1
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by LINE assay
 
Gene EPG5
Chromosomal Location 18q12.3-q21.1
Allelic Variant 1 ; VICI SYNDROME; VICIS
Identified Mutation p.Q336R; c.1007A>G
 
Gene EPG5
Chromosomal Location 18q12.3-q21.1
Allelic Variant 2 ; VICI SYNDROME; VICIS
Identified Mutation p.Q336R; c.1007A>G

Phenotypic Data

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Remarks Clinically affected; symptom onset began at 3 months; mother noted decreased movement towards end of pregnancy; mother was on enoxaparin during pregnancy; at 3 months of age, MRI showed multiple lesions including pontocerebellar hyperplasia, asgenesis of corpus callosum, and decreased myelination, failure to thrive; facial dysmorphism; symptoms include seizures, brain abnormalities including agenesis of the corpus callosum, cataracts, optic atrophy, chronic lung disease, mild hypertrophic cardiomyopathy, severe myopathy/hypotonia, GI dysmotility with G-tube, multiple pneumonias, urosepsis, obstructive sleep apnea, unable to follow verbal commands (this milestone has since been achieved); normal karyotype, WES GeneDx; genetic testing revealed a homozygous recessive mutation in the EPG5 gene: c.1007A>G (p.Q336R); treatments: G-tube, Nissan fundoplication, physical therapy, speech therapy, occupational therapy; assisted devices: wheelchair, orthotics, communication/learning device; no family history of the disease; parents are non-consanguineous; PubMed ID# 26917586, 27343256, 27343258; same subject as GM26249 (lymph)and GM27291 (stem cell); unaffected carrier mother is GM26251 (Lymph); unaffected carrier father is GM26250 (Lymph) and GM27894 (fibro); unaffected sister is GM27895 (fibro).

Publications

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Kane MS, Zhao J, Muskett J, Diplock A, Srivastava S, Hauser N, Deeken JF, Niederhuber JE, Smith WE, Vilboux T, Ebrahimi-Fakhari D, EPG5 Variants with Modest Functional Impact Result in an Ameliorated and Primarily Neurological Phenotype in a 35-Year-Old Patient with Vici Syndrome Neuropediatrics50:257-261 2019
PubMed ID: 31226715

External Links

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Gene Cards EPG5
NCBI GTR 242840 VICI SYNDROME; VICIS
615068 ECTOPIC P-GRANULES AUTOPHAGY PROTEIN 5 HOMOLOG; EPG5
OMIM 242840 VICI SYNDROME; VICIS
615068 ECTOPIC P-GRANULES AUTOPHAGY PROTEIN 5 HOMOLOG; EPG5
Omim Description IMMUNODEFICIENCY WITH CLEFT LIP/PALATE, CATARACT, HYPOPIGMENTATION,AND ABSENT CORPUS CALLOSUM

Culture Protocols

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Cumulative PDL at Freeze 2.82
Passage Frozen 1
Split Ratio 1:4
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Eagle's Minimum Essential Medium with Earle's salts and non-essential amino acids with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Supplement -
Pricing
Commercial/For-profit:
$373.00USD
Academic/Non-profit/Government:
$216.00USD
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