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GM00559 Fibroblast

Description:

NIEMANN-PICK DISEASE, TYPE A
SPHINGOMYELIN PHOSPHODIESTERASE 1, ACID LYSOSOMAL; SMPD1

Affected:

No

Sex:

Female

Age:

25 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Lysosomal Storage Diseases
Class Disorders of Lipid Metabolism
Cell Type Fibroblast
Transformant Untransformed
Race White
Ethnicity JEWISH
Relation to Proband parent
Confirmation Clinical summary/Case history
Species Homo sapiens
Common Name Human
Remarks Ashkenazi; clinically unaffected; positive family history; about 20% of normal sphingomyelinase activity and increased cholesterol biosynthesis in fibroblasts; parent of a child with type A; proband not in Repository; donor subject is heterozygous for a deletion of a single cytosine in exon 2 at codon 330 [990delC (which normally encodes a proline residue)] resulting in a frameshift leading to the formation of a premature stop (TGA) at codon 382 (1-BP DEL, Pro330FS) of the SMPD1 gene.

Characterizations

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IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase Isoenzyme Electrophoresis
 
sphingomyelin phosphodiesterase According to the submitter, biochemical test results for this subject showed decreased enzyme activity. EC Number: 3.1.4.12; 20% activity.
 
Gene SMPD1
Chromosomal Location 11p15.4-p15.1
Allelic Variant 1 607608.0011; NIEMANN-PICK DISEASE, TYPE A
Identified Mutation 1-BP DEL, PRO330FS; Levran et al. (Blood 80: 2081-2087, 1992) described a new mutation that causes type A Niemann-Pick disease (257200) in Ashkenazi Jewish patients. Deletion of a single cytosine in codon 330 of the SMPD1 cDNA (which normally encodes a proline residue) caused a frameshift that led to the formation of a premature stop (TGA) at codon 382. Three mutations, R496L (607608.0001), L302P (607608.0010), and this mutation, account for about 65% of the mutant SMPD1 alleles in Ashkenazi Jewish type A Niemann-Pick disease patients. The single base deletion causing the pro330FS mutation was in a region of the gene where 9 of the 10 residues were cytosines.

Phenotypic Data

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Remarks Ashkenazi; clinically unaffected; positive family history; about 20% of normal sphingomyelinase activity and increased cholesterol biosynthesis in fibroblasts; parent of a child with type A; proband not in Repository; donor subject is heterozygous for a deletion of a single cytosine in exon 2 at codon 330 [990delC (which normally encodes a proline residue)] resulting in a frameshift leading to the formation of a premature stop (TGA) at codon 382 (1-BP DEL, Pro330FS) of the SMPD1 gene.

Publications

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Levran O, Desnick RJ, Schuchman EH, Niemann-Pick disease: a frequent missense mutation in the acid sphingomyelinase gene of Ashkenazi Jewish type A and B patients. Proc Natl Acad Sci U S A88:3748-52 1991
PubMed ID: 2023926
 
Maziere JC, Maziere C, Gardette J, Mora L, Polonovski J, Changes in cholesterol metabolism in cultured fibroblasts from patients with Niemann-Pick disease. Biochem Biophys Res Commun102:113-8 1981
PubMed ID: 6272787

External Links

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dbSNP dbSNP ID: 10347
Gene Cards SMPD1
Gene Ontology GO:0004767 sphingomyelin phosphodiesterase activity
GO:0005764 lysosome
GO:0005975 carbohydrate metabolism
GO:0006685 sphingomyelin catabolism
GO:0007165 signal transduction
GO:0007399 neurogenesis
GO:0016798 hydrolase activity, acting on glycosyl bonds
NCBI Gene Gene ID:6609
NCBI GTR 257200 NIEMANN-PICK DISEASE, TYPE A
607608 SPHINGOMYELIN PHOSPHODIESTERASE 1, ACID LYSOSOMAL; SMPD1
OMIM 257200 NIEMANN-PICK DISEASE, TYPE A
607608 SPHINGOMYELIN PHOSPHODIESTERASE 1, ACID LYSOSOMAL; SMPD1
Omim Description NIEMANN-PICK DISEASE, TYPE A

Culture Protocols

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Split Ratio 1:2
Temperature 37 C
Percent CO2 5%
Medium Eagles Minimum Essential Medium with Earle's salts:Dulbecco's modified MEM with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Substrate None specified
Subcultivation Method trypsin-EDTA
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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