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GM28097 LCL from B-Lymphocyte

Description:

MENTAL RETARDATION, X-LINKED 106; MRX106
O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE; OGT

Affected:

Yes

Sex:

Male

Age:

5 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • External Links
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Biopsy Source Peripheral vein
Cell Type B-Lymphocyte
Tissue Type Blood
Transformant Epstein-Barr Virus
Sample Source LCL from B-Lymphocyte
Race White
Country of Origin USA
Family History N
Relation to Proband proband
Confirmation Molecular characterization before cell line submission to CCR
Species Homo sapiens
Common Name Human
Remarks Clinically affected. White matter disorder. Autism. Congenital heart problem (noncompaction cardiomyopathy). Dysmorphic craniofacial features. Developmental feeding disorder. Acute respiratory distress/arrest on day 3. Seizure on day 3 but none since.

Characterizations

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Gene OGT
Chromosomal Location Xq13.1
Allelic Variant 1 ; INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED 106; XLID106
Identified Mutation c.3040A>G (p.M1014V)
 
Gene LMNA
Chromosomal Location 1q21.2
Allelic Variant 1 ; CARDIOMYOPATHY, DILATED, 1A; CMD1A
Identified Mutation c.1634G>A (p.Arg545His)

Phenotypic Data

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Demographic Data
Relation to Proband proband
Age at Sampling 5 YR
Sex Male
Age of Onset(If not a control) 3 DA
Racial Category White
Country USA
 
Data Elements
Clinical Element Type: General NIGMS Catalog Remarks
  (Baseline)
Mutation Information
Gene, variant, consequence, and exon number:  OGT, C.3040A>G (P.M1014V), MISSENSE
Zygosity:  Hemizygous
Other variants:  LMNA, C.1634G>A (P.R545H), MISSENSE
Age of Symptom Onset and Age at Diagnosis
Age of Symptom Onset:  3 DAYS
In Utero History Information
Additional Information:  ABNORMAL FETAL HEART ULTRASOUND SCAN MATERNAL DIABETES THROMBOCYTOPENIA DURING PREGNANCY
Birth History Information
Failure to thrive
Additional Information:  THROMBOCYTOPENIA AFTER BIRTH
Dysmorphic Features
Additional Information:  PROMINENT FOREHEAD MINIMAL ELFIN FACE MICROGNATHIA
Neurological Symptoms
Seizures
White matter issues
Additional Information:  PERIVENTRICULAR WHITE MATTER HYPERINTENSITY A LITTLE IRREGULAR WALK
Optical and Audiological Symptoms
Musculoskeletal Symptoms
Additional Information:  JOINT LAXITY DECREASED MUSCLE MASS POOR-FAIR STRENGTH
Developmental Milestones
Additional Information:  DEVELOPMENTAL FEEDING DISORDER
Gastrointestinal Symptoms
Genitourinary Symptoms
Respiratory and Cardiovascular Symptoms
Atrial septal defect
Heart murmur
Additional Information:  APNEA PALPITATIONS VALVULAR PROBLEMS MILDLY DILATED LEFT AND RIGHT ATRIA LEFT VENTRICULAR NONCOMPACTION
Cognitive and Behavioral Symptoms
Autism spectrum disorder
Additional Information
Uncategorized Symptoms:  ALLERGIC TO DAIRY, NUTS, AND SESAME
Testing Performed
Neurological Testing:  BRAIN MRI: PERIVENTRICULAR WHITE MATTER HYPERINTENSITY A LITTLE IRREGULAR WALK
Respiratory and Cardiovascular Testing:  PRENATAL ULTRASOUND: LEFT VENTRICULAR THICKENING. WHITE CELL COUNTS LOW LOW PLATELES
Metabolic, Hematologic, and Endocrinologic Testing:  PRO-BRAIN NATURETIC PEPTIDE 15-TIMES ELEVATED
Treatments and Assistive Devices
Medications
 CARDIAC MEDICATIONS
Family History
Remarks Clinically affected. White matter disorder. Autism. Congenital heart problem (noncompaction cardiomyopathy). Dysmorphic craniofacial features. Developmental feeding disorder. Acute respiratory distress/arrest on day 3. Seizure on day 3 but none since.

External Links

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Gene Cards OGT
Gene Ontology GO:0005515 protein binding
GO:0005634 nucleus
GO:0005829 cytosol
GO:0006493 O-linked glycosylation
GO:0007165 signal transduction
GO:0007584 response to nutrients
GO:0008375 acetylglucosaminyltransferase activity
GO:0016740 transferase activity
GO:0016757 transferase activity, transferring glycosyl groups
NCBI Gene Gene ID:8473
NCBI GTR 300255 O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE; OGT
300997 MENTAL RETARDATION, X-LINKED 106; MRX106
OMIM 300255 O-LINKED N-ACETYLGLUCOSAMINE TRANSFERASE; OGT
300997 MENTAL RETARDATION, X-LINKED 106; MRX106

Culture Protocols

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Split Ratio 1:5
Temperature 37 C
Percent CO2 5%
Percent O2 AMBIENT
Medium Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not Inactivated
Substrate None specified
Subcultivation Method dilution - add fresh medium
Supplement -
Pricing
International/Commercial/For-profit:
$373.00USD
U.S. Academic/Non-profit/Government:
$216.00USD
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