Description:
XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP D; XPD
TRICHOTHIODYSTROPHY; TTD ICHTHYOSIFORM ERYTHRODERMA WITH HAIR ABNORMALITY AND MENTAL AND GROWTH RETARDATION, INCLUDED
EXCISION-REPAIR, COMPLEMENTING DEFECTIVE, IN CHINESE HAMSTER, 2; ERCC2
Repository
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NIGMS Human Genetic Cell Repository
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Subcollection |
Heritable Diseases |
Class |
Disorders of Nucleotide and Nucleic Acid Metabolism |
Class |
Repair Defective and Chromosomal Instability Syndromes |
Cell Type
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Fibroblast
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Tissue Type
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Skin
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Transformant
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Untransformed
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Race
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White
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Relation to Proband
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proband
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Confirmation
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Molecular characterization before cell line submission to CCR
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Species
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Homo sapiens
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Common Name
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Human
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Remarks
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Passage Frozen |
12 |
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IDENTIFICATION OF SPECIES OF ORIGIN |
Species of Origin Confirmed by Nucleoside Phosphorylase,Glucose-6-Phosphate Dehydrogenase, and Lactate Dehydrogenase Isoenzyme Electrophoresis |
|
Gene |
ERCC2 |
Chromosomal Location |
19q13.2-q13.3 |
Allelic Variant 1 |
126340.0007; TRICHOTHIODYSTROPHY |
Identified Mutation |
ARG658CYS; On 1 allele of the ERCC2 gene in a girl with trichothiodystrophy (601675), Takayama et al. (Am J Hum Genet 58:263-270, 1996) found a C-to-T transition at nucleotide position 2050, resulting in an arg658-to-cys amino acid change. The causative mutation on the other allele was identified as gly713-to-arg (126340.0008). Ichthyosis and loss of scalp hair occurred intermittently in the patient. |
|
Gene |
ERCC2 |
Chromosomal Location |
19q13.2-q13.3 |
Allelic Variant 2 |
126340.0008; TRICHOTHIODYSTROPHY |
Identified Mutation |
GLY713ARG; In a girl with trichothiodystrophy (601675), Takayama et al. (Am J Hum Genet 58:263-270, 1996) found a G-to-C transversion at nucleotide position 2215 of the ERCC2 gene, resulting in a gly713-to-arg amino acid substitution. They identified this mutation in compound heterozygous state with R658C (126340.0007). |
Remarks |
Clinically affected; born at 37 weeks gestation; birth weight = 2,140 g; birth length = 44 cm; feeding problems and poor weight gain in first few months of life; hospitalized for pneumonia at ages of 8, 11, and 23 months; all scalp hair was lost within 2-10 days during pneumonia episodes but it did grow back; at age 2 years, length = 70 cm (-5 SD), weight = 6.5 kg (-4 SD), and head circumference = 42 cm (-4 SD); round face with upslanting palpebral fissures, small nose, and slightly receding chin; scalp hair sparse and brittle; nystagmus and convergent strabismus; ichthyosis diagnosed at age 2 years; mild pectus carinatum; mild psychomotor retardation; no neurological symptoms; mild photosensitivity; scanning electron microscopy on hair revealed trichorrhexis nodosa-like fractures with exposure of cortical cells; very low level of cystine in scalp hair (7.59 g nitrogen in cystine per 100 g nitrogen in all amino acids, normal index 14.23); moderate but significant deficiency of DNA repair capacity was demonstrated which appeared to be confined to 6-4 photoproducts with normal excision repair of cyclobutane pyrimidine; cell fusion studies showed that cells from donor subject belong to XP complementation group D; donor subject is a compound heterozygote: one allele has a C>T transition at nucleotide 2050 of the ERCC2/XPD gene [2050C>T] resulting in a substitution of cysteine for arginine at codon 658 [Arg658Cys (R658C)] and the other allele has a G>C transversion at nucleotide 2215 of the ERCC2/XPD gene [2215G>C] resulting in a substitution of arginine for glycine at codon 713 [Gly713Arg (G713R)]. |
Vermeulen W, Rademakers S, Jaspers NG, Appeldoorn E, Raams A, Klein B, Kleijer WJ, Hansen LK, Hoeijmakers JH, A temperature-sensitive disorder in basal transcription and DNA repair in humans. Nat Genet27(3):299-303 2001 |
PubMed ID: 11242112 |
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Eveno E, Bourre F, Quilliet X, Chevallier-Lagente O, Roza L, Eker AP, Kleijer WJ, Nikaido O, Stefanini M, Hoeijmakers JH, et al, Different removal of ultraviolet photoproducts in genetically related xeroderma pigmentosum and trichothiodystrophy diseases. Cancer Res55(19):4325-4332 1995 |
PubMed ID: 7671243 |
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Kleijer WJ, Beemer FA, Boom BW, Intermittent hair loss in a child with PIBI(D)S syndrome and trichothiodystrophy with defective DNA repair-xeroderma pigmentosum group D. Am J Med Genet52(2):227-230 1994 |
PubMed ID: 7802014 |
Gene Cards |
ERCC2 |
Gene Ontology |
GO:0000287 magnesium ion binding |
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GO:0003677 DNA binding |
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GO:0004003 ATP-dependent DNA helicase activity |
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GO:0005515 protein binding |
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GO:0005524 ATP binding |
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GO:0005634 nucleus |
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GO:0005675 transcription factor TFIIH complex |
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GO:0006283 transcription-coupled nucleotide-excision repair |
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GO:0006355 regulation of transcription, DNA-dependent |
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GO:0006366 transcription from Pol II promoter |
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GO:0006917 induction of apoptosis |
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GO:0007605 perception of sound |
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GO:0016787 hydrolase activity |
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GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides |
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GO:0043139 5' to 3' DNA helicase activity |
NCBI Gene |
Gene ID:2068 |
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Gene ID:7269 |
NCBI GTR |
126340 EXCISION REPAIR, COMPLEMENTING DEFECTIVE, IN CHINESE HAMSTER, 2; ERCC2 |
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278730 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP D; XPD |
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601675 TRICHOTHIODYSTROPHY 1, PHOTOSENSITIVE; TTD1 |
OMIM |
126340 EXCISION REPAIR, COMPLEMENTING DEFECTIVE, IN CHINESE HAMSTER, 2; ERCC2 |
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278730 XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP D; XPD |
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601675 TRICHOTHIODYSTROPHY 1, PHOTOSENSITIVE; TTD1 |
Omim Description |
TRICHOTHIODYSTROPHY, TYPE 1, INCLUDED; TDD1, INCLUDED |
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XERODERMA PIGMENTOSUM IV; XP4TRICHOTHIODYSTROPHY WITH SUN SENSITIVITY, INCLUDED |
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XERODERMA PIGMENTOSUM VIII, FORMERLY; XP8, FORMERLY |
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XERODERMA PIGMENTOSUM, COMPLEMENTATION GROUP D; XPD |
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XP, GROUP D; XPDC |
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XP, GROUP H, FORMERLY; XPH, FORMERLY |
Passage Frozen |
12 |
Split Ratio |
1:3 |
Temperature |
37 C |
Percent CO2 |
5% |
Percent O2 |
AMBIENT |
Medium |
Ham's F10 with 2mM L-glutamine or equivalent |
Serum |
10% fetal bovine serum Not inactivated |
Substrate |
None specified |
Subcultivation Method |
trypsin-EDTA |
Supplement |
- |
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