GM10874
LCL from B-Lymphocyte
Description:
GAUCHER DISEASE, TYPE I
GLUCOSIDASE, ACID BETA; GBA
Repository
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NIGMS Human Genetic Cell Repository
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Subcollection |
Heritable Diseases Lysosomal Storage Diseases |
Class |
Disorders of Lipid Metabolism |
Biopsy Source
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Peripheral vein
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Cell Type
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B-Lymphocyte
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Tissue Type
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Blood
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Transformant
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Epstein-Barr Virus
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Sample Source
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LCL from B-Lymphocyte
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Race
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White
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Ethnicity
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ASHKENAZI
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Relation to Proband
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proband
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Confirmation
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Clinical summary/Case history
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Species
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Homo sapiens
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Common Name
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Human
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Remarks
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IDENTIFICATION OF SPECIES OF ORIGIN |
Species of Origin Confirmed by Nucleoside Phosphorylase, Glucose-6-Phosphate Dehydrogenase, and Lactate Dehydrogenase Isoenzyme Electrophoresis |
|
Gene |
GBA |
Chromosomal Location |
1q21 |
Allelic Variant 1 |
606463.0003; GAUCHER DISEASE, TYPE I |
Identified Mutation |
ASN370SER; By nucleotide sequence analysis of a genomic clone from an Ashkenazi Jewish patient with type I, Tsuji et al. [Proc. Nat. Acad. Sci. 85: 2349-2352 (1988] found a single-base mutation (adenosine to guanosine transition) in exon 9 of the glucocerebrosidase gene. This change resulted in the amino acid substitution of serine for asparagine. Transient expression studies following oligonucleotide-directed mutagenesis of the normal cDNA confirmed that the mutation results in loss of glucocerebrosidase activity. This mutation [1226G (N370S)] accounts for approximately 70% of mutations in the Jewish population. |
|
Gene |
GBA |
Chromosomal Location |
1q21 |
Allelic Variant 2 |
606463.0004; GAUCHER DISEASE, TYPE I |
Identified Mutation |
ARG119GLN, 3060G>A; Graves et al. [DNA 7: 521 (1988)] identified a G-to-A transition leading to a change from arginine to glutamine at position 119. This was present in single dose in the index patient and his affected third cousin (i.e., they were genetic compounds). This was the second single base mutation found in Ashkenazi Jewish patients with Gaucher disease type I. This mutation is indicated as arg120gln by others, e.g., Latham et al. [Am. J. Hum. Genet. 47: 79 (1990)]. |
Remarks |
Ashkenazi; massive splenomegaly; mild hepatomegaly; about 8% of normal fibroblast acid B-glucosidase act; donor subject is a compound heterozygote: one allele carries a single-base mutation (adenosine to guanosine transition) in exon 9 at nucleotide 1226 (1226A>G) of the glucocerebrosidase gene (GBA) which results in the amino acid substitution of serine for asparagine [Asn370Ser (N370S)]; the second allele has a G>A transition at nucleotide 476 (476G>A) which results in the substitution of glutamine for arginine at codon 120 [Arg120Gln (R120Q)] [codons are numbered from the first codon of the mature protein; the cDNA is numbered from the first initiating AUG] |
Yeeok Kang, Seong-Hyeuk Nam, Kyung Sun Park, Yoonjung Kim, Jong-Won Kim, Eunjung Lee, Jung Min Ko, Kyung-A Lee and Inho ParkEmail, DeviCNV: detection and visualization of exon-level copy number variants in targeted next-generation sequencing data BMC Bioinformatics19: 2018 |
PubMed ID: 30326846 |
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Theophilus B, Latham T, Grabowski GA, Smith FI, Gaucher disease: molecular heterogeneity and phenotype-genotype correlations. Am J Hum Genet45:212-25 1989 |
PubMed ID: 2502917 |
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Graves PN, Grabowski GA, Eisner R, Palese P, Smith FI, Gaucher disease type 1: cloning and characterization of a cDNA encoding acid beta-glucosidase from an Ashkenazi Jewish patient. DNA7:521-8 1988 |
PubMed ID: 3180993 |
dbSNP |
dbSNP ID: 11441 |
Gene Cards |
GBA |
Gene Ontology |
GO:0004348 glucosylceramidase activity |
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GO:0005764 lysosome |
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GO:0005975 carbohydrate metabolism |
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GO:0006665 sphingolipid metabolism |
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GO:0007040 lysosome organization and biogenesis |
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GO:0016020 membrane |
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GO:0016798 hydrolase activity, acting on glycosyl bonds |
NCBI Gene |
Gene ID:2629 |
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Gene ID:2630 |
NCBI GTR |
230800 GAUCHER DISEASE, TYPE I; GD1 |
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606463 GLUCOSIDASE, BETA, ACID; GBA |
OMIM |
230800 GAUCHER DISEASE, TYPE I; GD1 |
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606463 GLUCOSIDASE, BETA, ACID; GBA |
Omim Description |
ACID BETA-GLUCOSIDASE DEFICIENCY |
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GAUCHER DISEASE, NONCEREBRAL JUVENILE |
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GAUCHER DISEASE, TYPE I |
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GBA DEFICIENCYGLUCOSIDASE, ACID BETA, INCLUDED; GBA, INCLUDED |
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GD I |
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GLUCOCEREBROSIDASE DEFICIENCY |
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GLUCOCEREBROSIDASE PSEUDOGENE, INCLUDED; GBAP, INCLUDED |
Split Ratio |
1:3 |
Temperature |
37 C |
Percent CO2 |
5% |
Percent O2 |
AMBIENT |
Medium |
Roswell Park Memorial Institute Medium 1640 with 2mM L-glutamine or equivalent |
Serum |
15% fetal bovine serum Not Inactivated |
Substrate |
None specified |
Subcultivation Method |
dilution - add fresh medium |
Supplement |
- |
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