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GM00483 Fibroblast

Description:

HYPERCHOLESTEROLEMIA, FAMILIAL; FHC
LOW DENSITY LIPOPROTEIN RECEPTOR; LDLR

Affected:

Yes

Sex:

Female

Age:

37 YR (At Sampling)

  • Overview
  • Characterizations
  • Phenotypic Data
  • Publications
  • External Links
  • Images
  • Culture Protocols

Overview

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Repository NIGMS Human Genetic Cell Repository
Subcollection Heritable Diseases
Class Disorders of Lipid Metabolism
Cell Type Fibroblast
Tissue Type Skin
Transformant Untransformed
Race White
Ethnicity French Canadian
Country of Origin USA
Family Member 2
Relation to Proband mother
Confirmation Clinical summary/Case history
Species Homo sapiens
Common Name Human
Remarks Affected mother of a clinically diagnosed receptor negative child (GM00488); elevated plasma cholesterol; donor subject has one allele which has a G>A (TGT>TAT) transition at nucleotide 2000 in exon 14 of the LDLR gene (2000G>A) resulting in the substitution of tyrosine for cysteine at codon 646 [Cys646Tyr (C646Y)]- for methods, please refer to publication by Bodamer et al. (PMID 12406975); see same subject B-lymphocyte (GM01460).

Characterizations

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Passage Frozen 7
 
IDENTIFICATION OF SPECIES OF ORIGIN Species of Origin Confirmed by Nucleoside Phosphorylase Isoenzyme Electrophoresis
 
Gene LDLR
Chromosomal Location 19p13.2-p13.1
Allelic Variant 1 606945.0015; HYPERCHOLESTEROLEMIA, FAMILIAL
Identified Mutation CYS646TYR

Phenotypic Data

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Remarks Affected mother of a clinically diagnosed receptor negative child (GM00488); elevated plasma cholesterol; donor subject has one allele which has a G>A (TGT>TAT) transition at nucleotide 2000 in exon 14 of the LDLR gene (2000G>A) resulting in the substitution of tyrosine for cysteine at codon 646 [Cys646Tyr (C646Y)]- for methods, please refer to publication by Bodamer et al. (PMID 12406975); see same subject B-lymphocyte (GM01460).

Publications

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Innerarity TL, Pitas RE, Mahley RW, Receptor binding of cholesterol-induced high-density lipoproteins containing predominantly apoprotein E to cultured fibroblasts with mutations at the low-density lipoprotein receptor locus. Biochemistry19:4359-65 1980
PubMed ID: 7417411
 
Kruth HS, Vaughan M, Quantification of low density lipoprotein binding and cholesterol accumulation by single human fibroblasts using fluorescence microscopy. J Lipid Res21:123-30 1980
PubMed ID: 6986448

External Links

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dbSNP dbSNP ID: 19976
Gene Cards LDLR
Gene Ontology GO:0004888 transmembrane receptor activity
GO:0005041 low-density lipoprotein receptor activity
GO:0005319 lipid transporter activity
GO:0005509 calcium ion binding
GO:0005887 integral to plasma membrane
GO:0005905 coated pit
GO:0006493 O-linked glycosylation
GO:0006629 lipid metabolism
GO:0006869 lipid transport
GO:0006897 endocytosis
GO:0008034 lipoprotein binding
GO:0008203 cholesterol metabolism
NCBI Gene Gene ID:3949
NCBI GTR 143890 HYPERCHOLESTEROLEMIA, FAMILIAL, 1; FHCL1
606945 LOW DENSITY LIPOPROTEIN RECEPTOR; LDLR
OMIM 143890 HYPERCHOLESTEROLEMIA, FAMILIAL, 1; FHCL1
606945 LOW DENSITY LIPOPROTEIN RECEPTOR; LDLR
Omim Description FH
  HYPERCHOLESTEROLEMIA, FAMILIAL; FHC
  HYPERLIPOPROTEINEMIA, TYPE IIA
  LDL RECEPTOR DISORDERLOW DENSITY LIPOPROTEIN RECEPTOR, INCLUDED; LDLR, INCLUDED

Images

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View pedigree 

Culture Protocols

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Passage Frozen 7
Split Ratio 1:4
Temperature 37 C
Percent CO2 5%
Medium Eagle's Minimum Essential Medium with Earle's salts and non-essential amino acids with 2mM L-glutamine or equivalent
Serum 15% fetal bovine serum Not inactivated
Substrate None specified
Subcultivation Method trypsin-EDTA
Supplement -
Pricing
Commercial/For-profit:
$373.00USD
Academic/Non-profit/Government:
$216.00USD
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