HD12 HUMAN VARIATION PANEL

Description: HUMAN VARIATION PANEL - AFRICANS SOUTH OF THE SAHARA

Aliquot Size: 10 µg each

Sex: Males: 6 Females: 3

Brief Description: Some samples in the Human Variation Collection have been assigned a second catalogue number to indicate inclusion in the Human Variation Collection in addition to their original catalogue number. A complete list of the alternative sample numbers can be downloaded as an Excel file.
Visscher, H., Ross, C.J.D., Dube, M-P., Brown, A.M.K., Phillips, M.S., Carleton, B.C., and Hayden, M.R., Application of principal component analysis to pharmacogenomic studies in Canada The Pharmacogenomics Journal9:362-372 2009
PubMed ID: 19652663
 
Kelley JL, Swanson WJ, Dietary change and adaptive evolution of enamelin in humans and among primates Genetics178:1595-603 2008
PubMed ID: 18245370
 
Lo WS, Xu Z, Yu Z, Pun FW, Ng SK, Chen J, Tong KL, Zhao C, Xu X, Tsang SY, Harano M, Stöber G, Nimgaonkar VL, Xue H, Positive selection within the Schizophrenia-associated GABA(A) receptor beta(2) gene PloS one2:e462 2007
PubMed ID: 17520021
 
Rudd MK, Wray GA, Willard HF, The evolutionary dynamics of alpha-satellite Genome research16:88-96 2005
PubMed ID: 16344556
 
Sawyer SL, Wu LI, Akey JM, Emerman M, Malik HS, High-frequency persistence of an impaired allele of the retroviral defense gene TRIM5alpha in humans Current biology : CB16:95-100 2005
PubMed ID: 16401428
 
Fang Y, van Meurs JB, d'Alesio A, Jhamai M, Zhao H, Rivadeneira F, Hofman A, van Leeuwen JP, Jehan F, Pols HA, Uitterlinden AG, Promoter and 3'-untranslated-region haplotypes in the vitamin d receptor gene predispose to osteoporotic fracture: the rotterdam study. Am J Hum Genet77(5):807-23 2005
PubMed ID: 16252240
 
Sakagami T, Witherspoon DJ, Nakajima T, Jinnai N, Wooding S, Jorde LB, Hasegawa T, Suzuki E, Gejyo F, Inoue I, Local adaptation and population differentiation at the interleukin 13 and interleukin 4 loci Genes and immunity5:389-97 2004
PubMed ID: 15215888
 
Lakhman SS, Ghosh D, Blanco JG, Functional significance of a natural allelic variant of human carbonyl reductase 3 (CBR3) Drug metabolism and disposition: the biological fate of chemicals33:254-7 2004
PubMed ID: 15537833
 
Nakajima T, Wooding S, Sakagami T, Emi M, Tokunaga K, Tamiya G, Ishigami T, Umemura S, Munkhbat B, Jin F, Guan-Jun J, Hayasaka I, Ishida T, Saitou N, Pavelka K, Lalouel JM, Jorde LB, Inoue I, Natural Selection and Population History in the Human Angiotensinogen Gene (AGT): 736 Complete AGT Sequences in Chromosomes from Around the World. Am J Hum Genet74(5):898-916 2004
PubMed ID: 15077204
 
Wooding S, Kim UK, Bamshad MJ, Larsen J, Jorde LB, Drayna D, Natural selection and molecular evolution in PTC, a bitter-taste receptor gene. Am J Hum Genet74(4):637-46 2004
PubMed ID: 14997422
 
Hamann J, Kwakkenbos MJ, de Jong EC, Heus H, Olsen AS, van Lier RA, Inactivation of the EGF-TM7 receptor EMR4 after the Pan-Homo divergence. Eur J Immunol33(5):1365-71 2003
PubMed ID: 12731063
 
Fang Y, van Meurs JB, Bergink AP, Hofman A, van Duijn CM, van Leeuwen JP, Pols HA, Uitterlinden AG, Cdx-2 polymorphism in the promoter region of the human vitamin D receptor gene determines susceptibility to fracture in the elderly Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research18:1632-41 2003
PubMed ID: 12968672
 
Noonan JP, Li J, Nguyen L, Caoile C, Dickson M, Grimwood J, Schmutz J, Feldman MW, Myers RM, Extensive linkage disequilibrium, a common 167-kilobase deletion, and evidence of balancing selection in the human protocadherin alpha cluster American journal of human genetics72:621-35 2003
PubMed ID: 12577201
 
van Meurs JB, Schuit SC, Weel AE, van der Klift M, Bergink AP, Arp PP, Colin EM, Fang Y, Hofman A, van Duijn CM, van Leeuwen JP, Pols HA, Uitterlinden AG, Association of 5' estrogen receptor alpha gene polymorphisms with bone mineral density, vertebral bone area and fracture risk Human molecular genetics12:1745-54 2003
PubMed ID: 12837697

Catalog IDSexAge at Sampling
NA17348Female5 YR
   
NA17341Female16 YR
   
NA17344Female10 YR
   
NA17342Male53 YR
   
NA17347Male36 YR
   
NA17346Male17 YR
   
NA17343Male16 YR
NA17345Male16 YR
NA17343Male16 YR
NA17345Male16 YR
NA17349Male