HAPMAPPT06 96 WELL PLATE OF DNA SAMPLES

Description: INTERNATIONAL HAPMAP PROJECT - CEPH (UTAH RESIDENTS WITH ANCESTRY FROM NORTHERN AND WESTERN EUROPE) (II)

Aliquot Size: 50 µg each

Sex: Males: 44 Females: 46

Brief Description: The HAPMAPPT06 plate, from the CEPH Collection, includes a set of 26 trios, 5 duos and 2 singletons (90 samples). In addition, there are 5 duplicated samples and 1 buffer control. The concentration of each DNA sample to be plated is normalized and then this concentration is verified. The DNA concentration is 200 ng/µl and there are 50 µg of DNA per well. Once all samples are in place, a DNA fingerprint is determined for each sample to verify the identity on the plate. The specific position on the plates has been optimized by NHGRI to reduce any possible errors in sample identity during the genotyping process. The positions of the 5 duplicated samples and 1 buffer control are indicated by gray shading.
Gamazon ER, Ziliak D, Im HK, Lacroix B, Park DS, Cox NJ, Huang RS, Genetic Architecture of MicroRNA Expression: Implications for the Transcriptome and Complex Traits American journal of human genetics90:1046-63 2011
PubMed ID: 22658545
 
Pemberton, Trevor J., Wang, Chaolong, Li, Jun Z., and Rosenberg, Noah A., Inference of unexpected genetic relatedness among individuals in HapMap phase III Am J Hum Genet87:457-464 2010
PubMed ID: 20869033

Catalog IDSexFamilyRelationshipGeneMutation
NA12890Female1463paternal grandmother  
NA12889Male1463paternal grandfather  
NA12877Male1463father  
NA12832Female1458mother  
NA12843Female1458maternal grandmother  
NA12842Male1458maternal grandfather  
NA12828Female1456paternal grandmother  
NA12818Female1456mother  
NA12830Female1456maternal grandmother  
NA12827Male1456paternal grandfather  
NA12829Male1456maternal grandfather  
NA12817Male1456father  
NA12776Female1451paternal grandmother  
NA12767Female1451mother  
NA12778Female1451maternal grandmother  
NA12775Male1451paternal grandfather  
NA12777Male1451maternal grandfather  
NA12766Male1451father  
NA12749Female1444paternal grandmother  
NA12748Male1444paternal grandfather  
NA12739Male1444father  
NA11931Female1424paternal grandmother  
NA11930Male1424paternal grandfather  
NA10845Male1424father  
NA11918Female1423paternal grandmother  
NA10843Female1423motherUGT1A16 TA Repeats (Mono), 7 TA Repeats (Mono)
NA11920Female1423maternal grandmother  
NA11917Male1423paternal grandfather  
NA11919Male1423maternal grandfather  
NA10842Male1423fatherUGT1A17 TA Repeats (Bi)
NA12283Female1421paternal grandmother  
NA10840Female1421mother  
NA12287Female1421maternal grandmother  
NA12282Male1421paternal grandfather  
NA12286Male1421maternal grandfather  
NA12273Female1418paternal grandmother  
NA10836Female1418mother  
NA12275Female1418maternal grandmother  
NA12272Male1418paternal grandfather  
NA12274Male1418maternal grandfather  
NA10837Male1418father  
NA11892Female1377paternal grandmother  
NA10864Female1377mother  
NA11894Female1377maternal grandmother  
NA11891Male1377paternal grandfather  
NA11893Male1377maternal grandfather  
NA10865Male1377father  
NA12708Female1358mother  
NA12718Female1358maternal grandmother  
NA12414Female1355paternal grandmother  
NA12413Male1355paternal grandfather  
NA12485Male1355father  
NA12386Female1354mother  
NA12400Female1354maternal grandmother  
NA12399Male1354maternal grandfather  
NA12383Female1353paternal grandmother  
NA12376Female1353mother  
NA12489Female1353maternal grandmother  
NA12546Male1353maternal grandfather  
NA12375Male1353father  
NA11843Male1349paternal grandfather  
NA10853Male1349father  
NA10852Female1346mother  
NA12045Male1346maternal grandfather  
NA07346Female1345paternal grandmother  
NA07347Male1345paternal grandfather  
NA07349Male1345father  
NA10850Female1344mother  
NA12058Female1344maternal grandmother  
NA12341Female1330paternal grandmother  
NA12336Female1330mother  
NA12343Female1330maternal grandmother  
NA12340Male1330paternal grandfather  
NA12342Male1330maternal grandfather  
NA12335Male1330father  
NA07014Female13292mother  
NA07031Female13292maternal grandmother  
NA07051Male13292maternal grandfather  
NA07037Female13291paternal grandmother  
NA06997Female13291mother  
NA07045Female13291maternal grandmother  
NA07435Male13291paternal grandfather  
NA06986Male13291maternal grandfather  
NA06995Male13291father  
NA12348Female13281paternal grandmother  
NA12347Male13281paternal grandfather  
NA12344Male13281father  
NA06989Female1328mother  
NA12329Female1328daughter  
NA06984Male1328father