HAPMAPPT02 96 WELL PLATE OF DNA SAMPLES

Description: INTERNATIONAL HAPMAP PROJECT - JAPANESE IN TOKYO, JAPAN AND HAN CHINESE IN BEIJING, CHINA (I)

Aliquot Size: 50 µg each

Sex: Males: 45 Females: 45

Brief Description: The HAPMAPPT02 plate of 90 individual samples, includes 45 Japanese in Tokyo and 45 Han Chinese in Beijing. In addition, there are 5 duplicated samples and 1 buffer control. The concentration of each DNA sample to be plated is normalized and then this concentration is verified. The DNA concentration is 250 ng/µl and there are 50 µg of DNA per well. Once all samples are in place, a DNA fingerprint is determined for each sample to verify the identity on the plate. The specific position on the plates has been optimized by NHGRI to reduce any possible errors in sample identity during the genotyping process. The positions of the 5 duplicated samples and 1 buffer control are indicated by gray shading.

Subsequent to submission and the establishment of cell lines in this panel, a detailed analysis of HapMap data has shown that there are previously unreported family relationships to other members of this panel, as described in Nature 437:1299-1320 (2005). (See Supplementary Table 15 and Supplementary Information on p.12 [PMID: 16255080]).

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Thomson R, Quinn S, McKay J, Silver J, Bahlo M, Fitzgerald L, Foote S, Dickinson J, Stankovich J, The advantages of dense marker sets for linkage analysis with very large families Hum Genet121(3-4):459-68 2007
PubMed ID: 17252250
 
Wang ET, Moyzis RK, Genetic evidence for ongoing balanced selection at human DNA repair genes ERCC8, FANCC, and RAD51C Mutation research616:165-74 2007
PubMed ID: 17257630
 
Haiman CA, Dossus L, Setiawan VW, Stram DO, Dunning AM, Thomas G, Thun MJ, Albanes D, Altshuler D, Ardanaz E, Boeing H, Buring J, Burtt N, Calle EE, Chanock S, Clavel-Chapelon F, Colditz GA, Cox DG, Feigelson HS, Hankinson SE, Hayes RB, Henderson BE, Hirschhorn JN, Hoover R, Hunter DJ, Kaaks R, Kolonel LN, Le Marchand L, Lenner P, Lund E, Panico S, Peeters PH, Pike MC, Riboli E, Tjonneland A, Travis R, Trichopoulos D, Wacholder S, Ziegler RG, Genetic variation at the CYP19A1 locus predicts circulating estrogen levels but not breast cancer risk in postmenopausal women Cancer research67:1893-7 2007
PubMed ID: 17325027
 
He J, Zelikovsky A, Informative SNP selection methods based on SNP prediction IEEE transactions on nanobioscience6:60-7 2007
PubMed ID: 17393851
 
Hewitt AW, Samples JR, Allingham RR, Järvelä I, Kitsos G, Krishnadas SR, Richards JE, Lichter PR, Petersen MB, Sundaresan P, Wiggs JL, Mackey DA, Wirtz MK, Investigation of founder effects for the Thr377Met Myocilin mutation in glaucoma families from differing ethnic backgrounds Molecular vision13:487-92 2007
PubMed ID: 17417609
 
Iyengar SK, Adler SG, The application of the HapMap to diabetic nephropathy and other causes of chronic renal failure Seminars in nephrology27:223-36 2007
PubMed ID: 17418690
 
Jones TS, Yang W, Evans WE, Relling MV, Using HapMap tools in pharmacogenomic discovery: the thiopurine methyltransferase polymorphism Clinical pharmacology and therapeutics81:729-34 2007
PubMed ID: 17329987
 
Kuningas M, Mägi R, Westendorp RG, Slagboom PE, Remm M, van Heemst D, Haplotypes in the human Foxo1a and Foxo3a genes; impact on disease and mortality at old age European journal of human genetics : EJHG15:294-301 2007
PubMed ID: 17245409
 
Ma Q, Wyszynski DF, Farrell JJ, Kutlar A, Farrer LA, Baldwin CT, Steinberg MH, Fetal hemoglobin in sickle cell anemia: genetic determinants of response to hydroxyurea Pharmacogenomics J7(6):386-94 2007
PubMed ID: 17299377
 
Maniatis N, Collins A, Morton NE, Effects of single SNPs, haplotypes, and whole-genome LD maps on accuracy of association mapping Genetic epidemiology31:179-88 2007
PubMed ID: 17285621
 
Meex SJ, van Greevenbroek MM, Ayoubi TA, Vlietinck R, van Vliet-Ostaptchouk JV, Hofker MH, Vermeulen VM, Schalkwijk CG, Feskens EJ, Boer JM, Stehouwer CD, van der Kallen CJ, de Bruin TW, ATF6 polymorphisms and haplotypes are associated with impaired glucose homeostasis and type 2 diabetes in Dutch Caucasians J Clin Endocrinol Metab31:179-88 2007
PubMed ID: 17440018
 
Rollinson S, Snowden JS, Neary D, Morrison KE, Mann DM, Pickering-Brown SM, TDP-43 gene analysis in frontotemporal lobar degeneration Neuroscience letters419:1-4 2007
PubMed ID: 17434264
 
Schymick JC, Scholz SW, Fung HC, Britton A, Arepalli S, Gibbs JR, Lombardo F, Matarin M, Kasperaviciute D, Hernandez DG, Crews C, Bruijn L, Rothstein J, Mora G, Restagno G, Chiò A, Singleton A, Hardy J, Traynor BJ, Genome-wide genotyping in amyotrophic lateral sclerosis and neurologically normal controls: first stage analysis and public release of data Lancet neurology6:322-8 2007
PubMed ID: 17362836
 
Service S, International Collaborative Group on Isolated Populations S, Sabatti C, Freimer N, Tag SNPs chosen from HapMap perform well in several population isolates Genetic epidemiology31:189-94 2007
PubMed ID: 17323370
 
Sinilnikova OM, McKay JD, Tavtigian SV, Canzian F, DeSilva D, Biessy C, Monnier S, Dossus L, Boillot C, Gioia L, Hughes DJ, Jensen MK, Overvad K, Tjonneland A, Olsen A, Clavel-Chapelon F, Chajès V, Joulin V, Linseisen J, Chang-Claude J, Boeing H, Dahm S, Trichopoulou A, Trichopoulos D, Koliva M, Khaw KT, Bingham S, Allen NE, Key T, Palli D, Panico S, Berrino F, Tumino R, Vineis P, Bueno-de-Mesquita HB, Peeters PH, van Gils CH, Lund E, Pera G, Quirós JR, Dorronsoro M, Martínez García C, Tormo MJ, Ardanaz E, Hallmans G, Lenner P, Berglund G, Manjer J, Riboli E, Lenoir GM, Kaaks R, Haplotype-based analysis of common variation in the acetyl-coA carboxylase alpha gene and breast cancer risk: a case-control study nested within the European Prospective Investigation into Cancer and Nutrition Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology16:409-15 2007
PubMed ID: 17372234
 
Tenesa A, Navarro P, Hayes BJ, Duffy DL, Clarke GM, Goddard ME, Visscher PM, Recent human effective population size estimated from linkage disequilibrium Genome research17:520-6 2007
PubMed ID: 17351134
 
Vaclavicek A, Bermejo Lorenzo, Wappenschmidt B, Meindl A, Sutter C, Schmutzler K, Kiechle M, Bugert P, Burwinkel B, Bartram R, Hemminki K, Försti A, Genetic variation in the major mitotic checkpoint genes does not affect familial breast cancer risk Breast Cancer Res Treat106(2):205-13 2007
PubMed ID: 17268814
 
Vormfelde SV, Sehrt D, Toliat MR, Schirmer M, Meineke I, Tzvetkov M, Nürnberg P, Brockmöller J, Genetic Variation in the Renal Sodium Transporters NKCC2, NCC, and ENaC in Relation to the Effects of Loop Diuretic Drugs Clin Pharmacol Ther82(3):300-309 2007
PubMed ID: 17460608
 
Walsh S, Metter EJ, Ferrucci L, Roth SM, Activin RIIB and Follistatin Haplotype Associations with Muscle Mass and Strength in Humans J Appl Physiol102(6):2142-8 2007
PubMed ID: 17347381
 
Wang Z, Wang J, Tantoso E, Wang B, Tai AY, Ooi LL, Chong SS, Lee CG, Signatures of recent positive selection at the ATP-binding cassette drug transporter superfamily gene loci Human molecular genetics16:1367-80 2007
PubMed ID: 17412754
 
Witherspoon DJ, Wooding S, Rogers AR, Marchani EE, Watkins WS, Batzer MA, Jorde LB, Genetic Similarities Within and Between Human Populations Genetics176(1):351-9 2007
PubMed ID: 17339205
 
Smemo S, Borevitz JO, Redundancy in genotyping arrays PLoS ONE2:e287 2007
PubMed ID: 17356697
 
Soranzo N, Kelly L, Martinian L, Burley MW, Thom M, Sali A, Kroetz DL, Goldstein DB, Sisodiya SM, Lack of support for a role for RLIP76 (RALBP1) in response to treatment or predisposition to epilepsy Epilepsia48:674-83 2007
PubMed ID: 17437410
 
Stark M, Hayward N, Genome-wide loss of heterozygosity and copy number analysis in melanoma using high-density single-nucleotide polymorphism arrays Cancer research67:2632-42 2007
PubMed ID: 17363583
 
Stone JL, Merriman B, Cantor RM, Geschwind DH, Nelson SF, High density SNP association study of a major autism linkage region on chromosome 17 Human molecular genetics16:704-15 2007
PubMed ID: 17376794
 
Stranger BE, Forrest MS, Dunning M, Ingle CE, Beazley C, Thorne N, Redon R, Bird CP, de Grassi A, Lee C, Tyler-Smith C, Carter N, Scherer SW, Tavaré S, Deloukas P, Hurles ME, Dermitzakis ET, Relative impact of nucleotide and copy number variation on gene expression phenotypes Science (New York, NY)315:848-53 2007
PubMed ID: 17289997
 
Salonen JT, Uimari P, Aalto JM, Pirskanen M, Kaikkonen J, Todorova B, Hyppönen J, Korhonen VP, Asikainen J, Devine C, Tuomainen TP, Luedemann J, Nauck M, Kerner W, Stephens RH, New JP, Ollier WE, Gibson JM, Payton A, Horan MA, Pendleton N, Mahoney W, Meyre D, Delplanque J, Froguel P, Luzzatto O, Yakir B, Darvasi A, Type 2 diabetes whole-genome association study in four populations: the DiaGen consortium American journal of human genetics81:338-45 2007
PubMed ID: 17668382
 
Samani NJ, Erdmann J, Hall AS, Hengstenberg C, Mangino M, Mayer B, Dixon RJ, Meitinger T, Braund P, Wichmann HE, Barrett JH, König IR, Stevens SE, Szymczak S, Tregouet DA, Iles MM, Pahlke F, Pollard H, Lieb W, Cambien F, Fischer M, Ouwehand W, Blankenberg S, Balmforth AJ, Baessler A, Ball SG, Strom TM, Braenne I, Gieger C, Deloukas P, Tobin MD, Ziegler A, Thompson JR, Schunkert H, WTCCC and the Cardiogenics Consortium H, Genomewide association analysis of coronary artery disease The New England journal of medicine357:443-53 2007
PubMed ID: 17634449
 
Shen GQ, Li L, Girelli D, Seidelmann SB, Rao S, Fan C, Park JE, Xi Q, Li J, Hu Y, Olivieri O, Marchant K, Barnard J, Corrocher R, Elston R, Cassano J, Henderson S, Hazen SL, Plow EF, Topol EJ, Wang QK, An LRP8 variant is associated with familial and premature coronary artery disease and myocardial infarction American journal of human genetics81:780-91 2007
PubMed ID: 17847002
 
Paschou P, Ziv E, Burchard EG, Choudhry S, Rodriguez-Cintron W, Mahoney MW, Drineas P, PCA-correlated SNPs for structure identification in worldwide human populations PLoS genetics3:1672-86 2007
PubMed ID: 17892327
 
Plenge RM, Seielstad M, Padyukov L, Lee AT, Remmers EF, Ding B, Liew A, Khalili H, Chandrasekaran A, Davies LR, Li W, Tan AK, Bonnard C, Ong RT, Thalamuthu A, Pettersson S, Liu C, Tian C, Chen WV, Carulli JP, Beckman EM, Altshuler D, Alfredsson L, Criswell LA, Amos CI, Seldin MF, Kastner DL, Klareskog L, Gregersen PK, TRAF1-C5 as a risk locus for rheumatoid arthritis--a genomewide study The New England journal of medicine357:1199-209 2007
PubMed ID: 17804836
 
Plenge RM, Cotsapas C, Davies L, Price AL, de Bakker PI, Maller J, Pe'er I, Burtt NP, Blumenstiel B, DeFelice M, Parkin M, Barry R, Winslow W, Healy C, Graham RR, Neale BM, Izmailova E, Roubenoff R, Parker AN, Glass R, Karlson EW, Maher N, Hafler DA, Lee DM, Seldin MF, Remmers EF, Lee AT, Padyukov L, Alfredsson L, Coblyn J, Weinblatt ME, Gabriel SB, Purcell S, Klareskog L, Gregersen PK, Shadick NA, Daly MJ, Altshuler D, Two independent alleles at 6q23 associated with risk of rheumatoid arthritis Nature genetics39:1477-82 2007
PubMed ID: 17982456
 
Raelson JV, Little RD, Ruether A, Fournier H, Paquin B, Van Eerdewegh P, Bradley WE, Croteau P, Nguyen-Huu Q, Segal J, Debrus S, Allard R, Rosenstiel P, Franke A, Jacobs G, Nikolaus S, Vidal JM, Szego P, Laplante N, Clark HF, Paulussen RJ, Hooper JW, Keith TP, Belouchi A, Schreiber S, Genome-wide association study for Crohn's disease in the Quebec Founder Population identifies multiple validated disease loci Proceedings of the National Academy of Sciences of the United States of America104:14747-52 2007
PubMed ID: 17804789
 
Ramírez J, Liu W, Mirkov S, Desai AA, Chen P, Das S, Innocenti F, Ratain MJ, Lack of association between common polymorphisms in UGT1A9 and gene expression and activity Drug metabolism and disposition: the biological fate of chemicals35:2149-53 2007
PubMed ID: 17761781
 
Nannya Y, Taura K, Kurokawa M, Chiba S, Ogawa S, Evaluation of genome-wide power of genetic association studies based on empirical data from the HapMap project Human molecular genetics16:3494-505 2007
PubMed ID: 17666406
 
Newton-Cheh C, Guo CY, Wang TJ, O'donnell CJ, Levy D, Larson MG, Genome-wide association study of electrocardiographic and heart rate variability traits: the Framingham Heart Study BMC medical genetics8 Suppl 1:S7 2007
PubMed ID: 17903306
 
No authors listed, Second Phase of HapMap project completed Pharmacogenomics8(11):1489-91 2007
PubMed ID: 18034613
 
Nunkesser R, Bernholt T, Schwender H, Ickstadt K, Wegener I, Detecting high-order interactions of single nucleotide polymorphisms using genetic programming Bioinformatics (Oxford, England)23:3280-8 2007
PubMed ID: 18006552
 
Lesueur F, Oudot T, Heath S, Foglio M, Lathrop M, Prud'homme JF, Fischer J, ADAM33, a new candidate for psoriasis susceptibility PLoS ONE2:e906 2007
PubMed ID: 17878941
 
Hartford C, Yang W, Cheng C, Fan Y, Liu W, Treviño L, Pounds S, Neale G, Raimondi SC, Bogni A, Dolan ME, Pui CH, Relling MV, Genome scan implicates adhesion biological pathways in secondary leukemia Leukemia : official journal of the Leukemia Society of America, Leukemia Research Fund, UK21:2128-36 2007
PubMed ID: 17673902
 
Hayes MG, Pluzhnikov A, Miyake K, Sun Y, Ng MC, Roe CA, Below JE, Nicolae RI, Konkashbaev A, Bell GI, Cox NJ, Hanis CL, Identification of type 2 diabetes genes in Mexican Americans through genome-wide association studies Diabetes56:3033-44 2007
PubMed ID: 17846124
 
Huang QY, Kung AW, The association of common polymorphisms in the QPCT gene with bone mineral density in the Chinese population Journal of human genetics52:757-62 2007
PubMed ID: 17687619
 
Huang RS, Duan S, Shukla SJ, Kistner EO, Clark TA, Chen TX, Schweitzer AC, Blume JE, Dolan ME, Identification of genetic variants contributing to cisplatin-induced cytotoxicity by use of a genomewide approach American journal of human genetics81:427-37 2007
PubMed ID: 17701890
 
Huggins P, Pachter L, Sturmfels B, Toward the human genotope Bulletin of mathematical biology69:2723-35 2007
PubMed ID: 17874271
 
Keinan A, Mullikin JC, Patterson N, Reich D, Measurement of the human allele frequency spectrum demonstrates greater genetic drift in East Asians than in Europeans Nature genetics39:1251-5 2007
PubMed ID: 17828266
 
Kohler JR, Cutler DJ, Simultaneous discovery and testing of deletions for disease association in SNP genotyping studies American journal of human genetics81:684-99 2007
PubMed ID: 17846995
 
Kwan T, Benovoy D, Dias C, Gurd S, Serre D, Zuzan H, Clark TA, Schweitzer A, Staples MK, Wang H, Blume JE, Hudson TJ, Sladek R, Majewski J, Heritability of alternative splicing in the human genome Genome research17:1210-8 2007
PubMed ID: 17671095
 
Lamba JK, Crews K, Pounds S, Schuetz EG, Gresham J, Gandhi V, Plunkett W, Rubnitz J, Ribeiro R, Pharmacogenetics of deoxycytidine kinase: identification and characterization of novel genetic variants The Journal of pharmacology and experimental therapeutics323:935-45 2007
PubMed ID: 17855478
 
Lamy P, Andersen L, Dyrskjot L, Torring N, Wiuf C, A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays BMC Bioinformatics8(1):434 2007
PubMed ID: 17996079
 
Lee H, Sininger L, Jen JC, Cha YH, Baloh RW, Nelson SF, Association of progesterone receptor with migraine-associated vertigo Neurogenetics8:195-200 2007
PubMed ID: 17609999
 
Hanchard N, Elzein A, Trafford C, Rockett K, Pinder M, Jallow M, Harding R, Kwiatkowski D, McKenzie C, Classical sickle beta-globin haplotypes exhibit a high degree of long-range haplotype similarity in African and Afro-Caribbean populations BMC genetics8:52 2007
PubMed ID: 17688704
 
Hao K, Genome-wide selection of tag SNPs using multiple-marker correlation Bioinformatics (Oxford, England)23:3178-84 2007
PubMed ID: 18006555
 
The International HapMap Consortium , (Participants are arranged by institution and then alphabetically within institutions except for Principal Investigators and Project Leaders, as indicated.) , Genotyping centres: Perlegen Sciences , Frazer KA, Ballinger DG, Cox DR, Hinds DA, Stuve LL, Baylor College of Medicine and ParAllele BioScience LL, Gibbs RA, Belmont JW, Boudreau A, Hardenbol P, Leal SM, Pasternak S, Wheeler DA, Willis TD, Yu F, Beijing Genomics Institute F, Yang H, Zeng C, Gao Y, Hu H, Hu W, Li C, Lin W, Liu S, Pan H, Tang X, Wang J, Wang W, Yu J, Zhang B, Zhang Q, Zhao H, Zhao H, Zhou J, Broad Institute of Harvard and Massachusetts Institute of Technology J, Gabriel SB, Barry R, Blumenstiel B, Camargo A, Defelice M, Faggart M, Goyette M, Gupta S, Moore J, Nguyen H, Onofrio RC, Parkin M, Roy J, Stahl E, Winchester E, Ziaugra L, Altshuler D, Chinese National Human Genome Center at Beijing D, Shen Y, Yao Z, Chinese National Human Genome Center at Shanghai Z, Huang W, Chu X, He Y, Jin L, Liu Y, Shen Y, Sun W, Wang H, Wang Y, Wang Y, Xiong X, Xu L, Chinese University of Hong Kong L, Waye MM, Tsui SK, Hong Kong University of Science and Technology SK, Xue H, Wong JT, Illumina JT, Galver LM, Fan JB, Gunderson K, Murray SS, Oliphant AR, Chee MS, McGill University and Génome Québec Innovation Centre MS, Montpetit A, Chagnon F, Ferretti V, Leboeuf M, Olivier JF, Phillips MS, Roumy S, Sallée C, Verner A, Hudson TJ, University of California at San Francisco and Washington University TJ, Kwok PY, Cai D, Koboldt DC, Miller RD, Pawlikowska L, Taillon-Miller P, Xiao M, University of Hong Kong M, Tsui LC, Mak W, Qiang Song Y, Tam PK, University of Tokyo and RIKEN PK, Nakamura Y, Kawaguchi T, Kitamoto T, Morizono T, Nagashima A, Ohnishi Y, Sekine A, Tanaka T, Tsunoda T, Wellcome Trust Sanger Institute T, Deloukas P, Bird CP, Delgado M, Dermitzakis ET, Gwilliam R, Hunt S, Morrison J, Powell D, Stranger BE, Whittaker P, Bentley DR, Analysis groups: Broad Institute DR, Daly MJ, de Bakker PI, Barrett J, Chretien YR, Maller J, McCarroll S, Patterson N, Pe'er I, Price A, Purcell S, Richter DJ, Sabeti P, Saxena R, Schaffner SF, Sham PC, Varilly P, Altshuler D, Cold Spring Harbor Laboratory D, Stein LD, Krishnan L, Vernon Smith A, Tello-Ruiz MK, Thorisson GA, Johns Hopkins University School of Medicine GA, Chakravarti A, Chen PE, Cutler DJ, Kashuk CS, Lin S, University of Michigan S, Abecasis GR, Guan W, Li Y, Munro HM, Steve Qin Z, Thomas DJ, University of Oxford DJ, McVean G, Auton A, Bottolo L, Cardin N, Eyheramendy S, Freeman C, Marchini J, Myers S, Spencer C, Stephens M, Donnelly P, University of Oxford,Wellcome Trust Centre for Human Genetics P, Cardon LR, Clarke G, Evans DM, Morris AP, Weir BS, RIKEN BS, Tsunoda T, US National Institutes of Health T, Mullikin JC, US National Institutes of Health National Center for Biotechnology Information JC, Sherry ST, Feolo M, Skol A, Community engagement/public consultation and sample collection groups: Beijing Normal University and Beijing Genomics Institute A, Zhang H, Zeng C, Zhao H, Health Sciences University of Hokkaido, Eubios Ethics Institute, and Shinshu University H, Matsuda I, Fukushima Y, Macer DR, Suda E, Howard University and University of Ibadan E, Rotimi CN, Adebamowo CA, Ajayi I, Aniagwu T, Marshall PA, Nkwodimmah C, Royal CD, University of Utah CD, Leppert MF, Dixon M, Peiffer A, Ethical, legal and social issues: Chinese Academy of Social Sciences A, Qiu R, Genetic Interest Group R, Kent A, Kyoto University A, Kato K, Nagasaki University K, Niikawa N, University of Ibadan School of Medicine N, Adewole IF, University of Montréal IF, Knoppers BM, University of Oklahoma BM, Foster MW, Vanderbilt University MW, Wright Clayton E, Wellcome Trust E, Watkin J, SNP discovery: Baylor College of Medicine J, Gibbs RA, Belmont JW, Muzny D, Nazareth L, Sodergren E, Weinstock GM, Wheeler DA, Yakub I, Broad Institute of Harvard and Massachusetts Institute of Technology I, Gabriel SB, Onofrio RC, Richter DJ, Ziaugra L, Birren BW, Daly MJ, Altshuler D, Washington University D, Wilson RK, Fulton LL, Wellcome Trust Sanger Institute LL, Rogers J, Burton J, Carter NP, Clee CM, Griffiths M, Jones MC, McLay K, Plumb RW, Ross MT, Sims SK, Willey DL, Scientific management: Chinese Academy of Sciences DL, Chen Z, Han H, Kang L, Genome Canada L, Godbout M, Wallenburg JC, Génome Québec JC, L'archevêque P, Bellemare G, Japanese Ministry of Education, Culture, Sports, Science and Technology G, Saeki K, Ministry of Science and Technology of the People’s Republic of China K, Wang H, An D, Fu H, Li Q, Wang Z, The Human Genetic Resource Administration of China Z, Wang R, The SNP Consortium R, Holden AL, US National Institutes of Health AL, Brooks LD, McEwen JE, Guyer MS, Ota Wang V, Peterson JL, Shi M, Spiegel J, Sung LM, Zacharia LF, Collins FS, Wellcome Trust FS, Kennedy K, Jamieson R, Stewart J, A second generation human haplotype map of over 31 million SNPs Nature449:851-861 2007
PubMed ID: 17943122
 
Eberle MA, Ng PC, Kuhn K, Zhou L, Peiffer DA, Galver L, Viaud-Martinez KA, Lawley CT, Gunderson KL, Shen R, Murray SS, Power to detect risk alleles using genome-wide tag SNP panels PLoS genetics3:1827-37 2007
PubMed ID: 17922574
 
Enomoto H, Noguchi E, Iijima S, Takahashi T, Hayakawa K, Ito M, Kano T, Aoki T, Suzuki Y, Koga M, Tamari M, Shiohara T, Otsuka F, Arinami T, Single nucleotide polymorphism-based genome-wide linkage analysis in Japanese atopic dermatitis families BMC dermatology7:5 2007
PubMed ID: 17900373
 
Estivill X, Armengol L, Copy number variants and common disorders: filling the gaps and exploring complexity in genome-wide association studies PLoS genetics3:1787-99 2007
PubMed ID: 17953491
 
Florez JC, Manning AK, Dupuis J, McAteer J, Irenze K, Gianniny L, Mirel DB, Fox CS, Cupples LA, Meigs JB, A 100K genome-wide association scan for diabetes and related traits in the Framingham Heart Study: replication and integration with other genome-wide datasets Diabetes56:3063-74 2007
PubMed ID: 17848626
 
Beyens G, Daroszewska A, de Freitas F, Fransen E, Vanhoenacker F, Verbruggen L, Zmierczak HG, Westhovens R, Van Offel J, Ralston SH, Devogelaer JP, Van Hul W, Identification of sex-specific associations between polymorphisms of the osteoprotegerin gene, TNFRSF11B, and Paget's disease of bone Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research22:1062-71 2007
PubMed ID: 17388729
 
Askew DJ, Cataltepe S, Kumar V, Edwards C, Pace SM, Howarth RN, Pak SC, Askew YS, Brömme D, Luke CJ, Whisstock JC, Silverman GA, SERPINB11 Is a New Noninhibitory Intracellular Serpin: COMMON SINGLE NUCLEOTIDE POLYMORPHISMS IN THE SCAFFOLD IMPAIR CONFORMATIONAL CHANGE The Journal of biological chemistry282:24948-60 2007
PubMed ID: 17562709
 
Gudbjartsson DF, Arnar DO, Helgadottir A, Gretarsdottir S, Holm H, Sigurdsson A, Jonasdottir A, Baker A, Thorleifsson G, Kristjansson K, Palsson A, Blondal T, Sulem P, Backman VM, Hardarson GA, Palsdottir E, Helgason A, Sigurjonsdottir R, Sverrisson JT, Kostulas K, Ng MC, Baum L, So WY, Wong KS, Chan JC, Furie KL, Greenberg SM, Sale M, Kelly P, MacRae CA, Smith EE, Rosand J, Hillert J, Ma RC, Ellinor PT, Thorgeirsson G, Gulcher JR, Kong A, Thorsteinsdottir U, Stefansson K, Variants conferring risk of atrial fibrillation on chromosome 4q25 Nature448:353-7 2007
PubMed ID: 17603472
 
Gudmundsson J, Sulem P, Steinthorsdottir V, Bergthorsson JT, Thorleifsson G, Manolescu A, Rafnar T, Gudbjartsson D, Agnarsson BA, Baker A, Sigurdsson A, Benediktsdottir KR, Jakobsdottir M, Blondal T, Stacey SN, Helgason A, Gunnarsdottir S, Olafsdottir A, Kristinsson KT, Birgisdottir B, Ghosh S, Thorlacius S, Magnusdottir D, Stefansdottir G, Kristjansson K, Bagger Y, Wilensky RL, Reilly MP, Morris AD, Kimber CH, Adeyemo A, Chen Y, Zhou J, So WY, Tong PC, Ng MC, Hansen T, Andersen G, Borch-Johnsen K, Jorgensen T, Tres A, Fuertes F, Ruiz-Echarri M, Asin L, Saez B, van Boven E, Klaver S, Swinkels DW, Aben KK, Graif T, Cashy J, Suarez BK, van Vierssen Trip O, Frigge ML, Ober C, Hofker MH, Wijmenga C, Christiansen C, Rader DJ, Palmer CN, Rotimi C, Chan JC, Pedersen O, Sigurdsson G, Benediktsson R, Jonsson E, Einarsson GV, Mayordomo JI, Catalona WJ, Kiemeney LA, Barkardottir RB, Gulcher JR, Thorsteinsdottir U, Kong A, Stefansson K, Two variants on chromosome 17 confer prostate cancer risk, and the one in TCF2 protects against type 2 diabetes Nature genetics39:977-83 2007
PubMed ID: 17603485
 
Hakonarson H, Grant SF, Bradfield JP, Marchand L, Kim CE, Glessner JT, Grabs R, Casalunovo T, Taback SP, Frackelton EC, Lawson ML, Robinson LJ, Skraban R, Lu Y, Chiavacci RM, Stanley CA, Kirsch SE, Rappaport EF, Orange JS, Monos DS, Devoto M, Qu HQ, Polychronakos C, A genome-wide association study identifies KIAA0350 as a type 1 diabetes gene Nature448:591-4 2007
PubMed ID: 17632545
 
Hamvas A, Wegner DJ, Carlson CS, Bergmann KR, Trusgnich MA, Fulton L, Kasai Y, An P, Mardis ER, Wilson RK, Cole FS, Comprehensive genetic variant discovery in the surfactant protein B gene Pediatric research62:170-5 2007
PubMed ID: 17597650
 
Helgadottir A, Thorleifsson G, Manolescu A, Gretarsdottir S, Blondal T, Jonasdottir A, Jonasdottir A, Sigurdsson A, Baker A, Palsson A, Masson G, Gudbjartsson DF, Magnusson KP, Andersen K, Levey AI, Backman VM, Matthiasdottir S, Jonsdottir T, Palsson S, Einarsdottir H, Gunnarsdottir S, Gylfason A, Vaccarino V, Hooper WC, Reilly MP, Granger CB, Austin H, Rader DJ, Shah SH, Quyyumi AA, Gulcher JR, Thorgeirsson G, Thorsteinsdottir U, Kong A, Stefansson K, A common variant on chromosome 9p21 affects the risk of myocardial infarction Science316:1491-3 2007
PubMed ID: 17478679
 
Huang BE, Amos CI, Lin DY, Detecting haplotype effects in genomewide association studies Genet Epidemiol31(8):803-812 2007
PubMed ID: 17549762
 
Rousseau K, Byrne C, Griesinger G, Leung A, Chung A, Hill AS, Swallow DM, Allelic Association and Recombination Hotspots in the Mucin Gene (MUC) Complex on Chromosome 11p155 Ann Hum Genet71:561-569 2007
PubMed ID: 17535267
 
Scott LJ, Mohlke KL, Bonnycastle LL, Willer CJ, Li Y, Duren WL, Erdos MR, Stringham HM, Chines PS, Jackson AU, Prokunina-Olsson L, Ding CJ, Swift AJ, Narisu N, Hu T, Pruim R, Xiao R, Li XY, Conneely KN, Riebow NL, Sprau AG, Tong M, White PP, Hetrick KN, Barnhart MW, Bark CW, Goldstein JL, Watkins L, Xiang F, Saramies J, Buchanan TA, Watanabe RM, Valle TT, Kinnunen L, Abecasis GR, Pugh EW, Doheny KF, Bergman RN, Tuomilehto J, Collins FS, Boehnke M, A genome-wide association study of type 2 diabetes in Finns detects multiple susceptibility variants Science316:1341-5 2007
PubMed ID: 17463248
 
Scuteri A, Sanna S, Chen WM, Uda M, Albai G, Strait J, Najjar S, Nagaraja R, Orrú M, Usala G, Dei M, Lai S, Maschio A, Busonero F, Mulas A, Ehret GB, Fink AA, Weder AB, Cooper RS, Galan P, Chakravarti A, Schlessinger D, Cao A, Lakatta E, Abecasis GR, Genome-Wide Association Scan Shows Genetic Variants in the FTO Gene Are Associated with Obesity-Related Traits PLoS Genet3:e115 2007
PubMed ID: 17658951
 
Shi M, Umbach DM, Weinberg CR, Identification of risk-related haplotypes with the use of multiple SNPs from nuclear families American journal of human genetics81:53-66 2007
PubMed ID: 17564963
 
Stacey SN, Manolescu A, Sulem P, Rafnar T, Gudmundsson J, Gudjonsson SA, Masson G, Jakobsdottir M, Thorlacius S, Helgason A, Aben KK, Strobbe LJ, Albers-Akkers MT, Swinkels DW, Henderson BE, Kolonel LN, Le Marchand L, Millastre E, Andres R, Godino J, Garcia-Prats MD, Polo E, Tres A, Mouy M, Saemundsdottir J, Backman VM, Gudmundsson L, Kristjansson K, Bergthorsson JT, Kostic J, Frigge ML, Geller F, Gudbjartsson D, Sigurdsson H, Jonsdottir T, Hrafnkelsson J, Johannsson J, Sveinsson T, Myrdal G, Grimsson HN, Jonsson T, von Holst S, Werelius B, Margolin S, Lindblom A, Mayordomo JI, Haiman CA, Kiemeney LA, Johannsson OT, Gulcher JR, Thorsteinsdottir U, Kong A, Stefansson K, Common variants on chromosomes 2q35 and 16q12 confer susceptibility to estrogen receptor-positive breast cancer Nature genetics39:865-9 2007
PubMed ID: 17529974
 
Steinthorsdottir V, Thorleifsson G, Reynisdottir I, Benediktsson R, Jonsdottir T, Walters GB, Styrkarsdottir U, Gretarsdottir S, Emilsson V, Ghosh S, Baker A, Snorradottir S, Bjarnason H, Ng MC, Hansen T, Bagger Y, Wilensky RL, Reilly MP, Adeyemo A, Chen Y, Zhou J, Gudnason V, Chen G, Huang H, Lashley K, Doumatey A, So WY, Ma RC, Andersen G, Borch-Johnsen K, Jorgensen T, van Vliet-Ostaptchouk JV, Hofker MH, Wijmenga C, Christiansen C, Rader DJ, Rotimi C, Gurney M, Chan JC, Pedersen O, Sigurdsson G, Gulcher JR, Thorsteinsdottir U, Kong A, Stefansson K, A variant in CDKAL1 influences insulin response and risk of type 2 diabetes Nature genetics39:770-5 2007
PubMed ID: 17460697
 
Sun S, Greenwood CM, Neal RM, Haplotype inference using a Bayesian Hidden Markov model Genet Epidemiol31(8):937-948 2007
PubMed ID: 17630649
 
Todd JA, Walker NM, Cooper JD, Smyth DJ, Downes K, Plagnol V, Bailey R, Nejentsev S, Field SF, Payne F, Lowe CE, Szeszko JS, Hafler JP, Zeitels L, Yang JH, Vella A, Nutland S, Stevens HE, Schuilenburg H, Coleman G, Maisuria M, Meadows W, Smink LJ, Healy B, Burren OS, Lam AA, Ovington NR, Allen J, Adlem E, Leung HT, Wallace C, Howson JM, Guja C, Ionescu-Tîrgoviste C, Genetics of Type 1 Diabetes in Finland C, Simmonds MJ, Heward JM, Gough SC, Wellcome Trust Case Control Consortium SC, Dunger DB, Wicker LS, Clayton DG, Robust associations of four new chromosome regions from genome-wide analyses of type 1 diabetes Nature genetics39:857-64 2007
PubMed ID: 17554260
 
Tomlinson I, Webb E, Carvajal-Carmona L, Broderick P, Kemp Z, Spain S, Penegar S, Chandler I, Gorman M, Wood W, Barclay E, Lubbe S, Martin L, Sellick G, Jaeger E, Hubner R, Wild R, Rowan A, Fielding S, Howarth K, the CORGI Consortium K, Silver A, Atkin W, Muir K, Logan R, Kerr D, Johnstone E, Sieber O, Gray R, Thomas H, Peto J, Cazier JB, Houlston R, A genome-wide association scan of tag SNPs identifies a susceptibility variant for colorectal cancer at 8q2421 Nature Genetics39:984-988 2007
PubMed ID: 17618284
 
van Heel DA, Franke L, Hunt KA, Gwilliam R, Zhernakova A, Inouye M, Wapenaar MC, Barnardo MC, Bethel G, Holmes GK, Feighery C, Jewell D, Kelleher D, Kumar P, Travis S, Walters JR, Sanders DS, Howdle P, Swift J, Playford RJ, McLaren WM, Mearin ML, Mulder CJ, McManus R, McGinnis R, Cardon LR, Deloukas P, Wijmenga C, A genome-wide association study for celiac disease identifies risk variants in the region harboring IL2 and IL21 Nature genetics39:827-9 2007
PubMed ID: 17558408
 
Van Limbergen J, Nimmo ER, Russell RK, Drummond HE, Smith L, Anderson NH, Davies G, Arnott ID, Wilson DC, Satsangi J, Investigation of NOD1/CARD4 variation in Inflammatory Bowel Disease using a haplotype-tagging strategy Human Molecular Genetics16(18):2175-86 2007
PubMed ID: 17613538
 
Wellcome Trust Case Control Consortium, Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls Nature447:661-78 2007
PubMed ID: 17554300
 
Xiao Y, Segal MR, Yang YH, Yeh RF, A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays Bioinformatics (Oxford, England)23:1459-67 2007
PubMed ID: 17459966
 
Xu Z, Kaplan NL, Taylor JA, Tag SNP selection for candidate gene association studies using HapMap and gene resequencing data European Journal of Human Genetics15(10):1063-70 2007
PubMed ID: 17568388
 
Yamazaki K, Onouchi Y, Takazoe M, Kubo M, Nakamura Y, Hata A, Association analysis of genetic variants in IL23R, ATG16L1 and 5p131 loci with Crohn's disease in Japanese patients Journal of human genetics52:575-83 2007
PubMed ID: 17534574
 
Zanke BW, Greenwood CM, Rangrej J, Kustra R, Tenesa A, Farrington SM, Prendergast J, Olschwang S, Chiang T, Crowdy E, Ferretti V, Laflamme P, Sundararajan S, Roumy S, Olivier JF, Robidoux F, Sladek R, Montpetit A, Campbell P, Bezieau S, O'shea AM, Zogopoulos G, Cotterchio M, Newcomb P, McLaughlin J, Younghusband B, Green R, Green J, Porteous ME, Campbell H, Blanche H, Sahbatou M, Tubacher E, Bonaiti-Pellié C, Buecher B, Riboli E, Kury S, Chanock SJ, Potter J, Thomas G, Gallinger S, Hudson TJ, Dunlop MG, Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24 Nature Genetics39:989-994 2007
PubMed ID: 17618283
 
Zeggini E, Weedon MN, Lindgren CM, Frayling TM, Elliott KS, Lango H, Timpson NJ, Perry JR, Rayner NW, Freathy RM, Barrett JC, Shields B, Morris AP, Ellard S, Groves CJ, Harries LW, Marchini JL, Owen KR, Knight B, Cardon LR, Walker M, Hitman GA, Morris AD, Doney AS, Wellcome Trust Case Control Consortium (WTCCC) AS, Burton PR, Clayton DG, Craddock N, Deloukas P, Duncanson A, Kwiatkowski DP, Ouwehand WH, Samani NJ, Todd JA, Donnelly P, Davison D, Easton D, Evans D, Leung HT, Spencer CC, Tobin MD, Attwood AP, Boorman JP, Cant B, Everson U, Hussey JM, Jolley JD, Knight AS, Koch K, Meech E, Nutland S, Prowse CV, Stevens HE, Taylor NC, Walters GR, Walker NM, Watkins NA, Winzer T, Jones RW, McArdle WL, Ring SM, Strachan DP, Pembrey M, Breen G, St Clair D, Caesar S, Gordon-Smith K, Jones L, Fraser C, Green EK, Grozeva D, Hamshere ML, Holmans PA, Jones IR, Kirov G, Moskvina V, Nikolov I, O'donovan MC, Owen MJ, Collier DA, Elkin A, Farmer A, Williamson R, McGuffin P, Young AH, Ferrier IN, Ball SG, Balmforth AJ, Barrett JH, Bishop DT, Iles MM, Maqbool A, Yuldasheva N, Hall AS, Braund PS, Dixon RJ, Mangino M, Stevens S, Thompson JR, Bredin F, Tremelling M, Parkes M, Drummond H, Lees CW, Nimmo ER, Satsangi J, Fisher SA, Forbes A, Lewis CM, Onnie CM, Prescott NJ, Sanderson J, Mathew CG, Barbour J, Mohiuddin MK, Todhunter CE, Mansfield JC, Ahmad T, Cummings FR, Jewell DP, Webster J, Brown MJ, Lathrop GM, Connell J, Dominiczak A, Braga Marcano CA, Burke B, Dobson R, Gungadoo J, Lee KL, Munroe PB, Newhouse SJ, Onipinla A, Wallace C, Xue M, Caulfield M, Farrall M, Barton A, Bruce IN, Donovan H, Eyre S, Gilbert PD, Hider SL, Hinks AM, John SL, Potter C, Silman AJ, Symmons DP, Thomson W, Worthington J, Dunger DB, Widmer B, Newport M, Sirugo G, Lyons E, Vannberg F, Hill AV, Bradbury LA, Farrar C, Pointon JJ, Wordsworth P, Brown MA, Franklyn JA, Heward JM, Simmonds MJ, Gough SC, Seal S, Stratton MR, Rahman N, Ban M, Goris A, Sawcer SJ, Compston A, Conway D, Jallow M, Rockett KA, Bumpstead SJ, Chaney A, Downes K, Ghori MJ, Gwilliam R, Hunt SE, Inouye M, Keniry A, King E, McGinnis R, Potter S, Ravindrarajah R, Whittaker P, Widden C, Withers D, Cardin NJ, Ferreira T, Pereira-Gale J, Hallgrimsdóttir IB, Howie BN, Su Z, Teo YY, Vukcevic D, Bentley D, Compston A, Ouwehand NJ, Samani MR, Isaacs JD, Morgan AW, Wilson GD, Ardern-Jones A, Berg J, Brady A, Bradshaw N, Brewer C, Brice G, Bullman B, Campbell J, Castle B, Cetnarsryj R, Chapman C, Chu C, Coates N, Cole T, Davidson R, Donaldson A, Dorkins H, Douglas F, Eccles D, Eeles R, Elmslie F, Evans DG, Goff S, Goodman S, Goudie D, Gray J, Greenhalgh L, Gregory H, Hodgson SV, Homfray T, Houlston RS, Izatt L, Jackson L, Jeffers L, Johnson-Roffey V, Kavalier F, Kirk C, Lalloo F, Langman C, Locke I, Longmuir M, Mackay J, Magee A, Mansour S, Miedzybrodzka Z, Miller J, Morrison P, Murday V, Paterson J, Pichert G, Porteous M, Rahman N, Rogers M, Rowe S, Shanley S, Saggar A, Scott G, Side L, Snadden L, Steel M, Thomas M, Thomas S, McCarthy MI, Hattersley AT, Replication of genome-wide association signals in UK samples reveals risk loci for type 2 diabetes Science316:1336-41 2007
PubMed ID: 17463249
 
Zhao ZZ, Nyholt DR, Le L, Thomas S, Engwerda C, Randall L, Treloar SA, Montgomery GW, Genetic variation in tumour necrosis factor and lymphotoxin is not associated with endometriosis in an Australian sample Human reproduction (Oxford, England)22:2389-97 2007
PubMed ID: 17595314
 
Cooper D, Smyth J, Bailey R, Payne F, Downes K, Godfrey M, Masters J, Zeitels R, Vella A, Walker M, Todd A, The candidate genes TAF5L, TCF7, PDCD1, IL6 and ICAM1 cannot be excluded from having effects in type 1 diabetes BMC Med Genet8(1):71 2007
PubMed ID: 18045485
 
Sabeti PC, Varilly P, Fry B, Lohmueller J, Hostetter E, Cotsapas C, Xie X, Byrne EH, McCarroll SA, Gaudet R, Schaffner SF, Lander ES, The International HapMap Consortium ES, Genotyping centres: Perlegen Sciences ES, Frazer KA, Ballinger DG, Cox DR, Hinds DA, Stuve LL, Baylor College of Medicine and ParAllele BioScience LL, Gibbs RA, Belmont JW, Boudreau A, Hardenbol P, Leal SM, Pasternak S, Wheeler DA, Willis TD, Yu F, Beijing Genomics Institute F, Yang H, Zeng C, Gao Y, Hu H, Hu W, Li C, Lin W, Liu S, Pan H, Tang X, Wang J, Wang W, Yu J, Zhang B, Zhang Q, Zhao H, Zhao H, Zhou J, Broad Institute of Harvard and Massachusetts Institute of Technology J, Gabriel SB, Barry R, Blumenstiel B, Camargo A, Defelice M, Faggart M, Goyette M, Gupta S, Moore J, Nguyen H, Onofrio RC, Parkin M, Roy J, Stahl E, Winchester E, Ziaugra L, Altshuler D, Chinese National Human Genome Center at Beijing D, Shen Y, Yao Z, Chinese National Human Genome Center at Shanghai Z, Huang W, Chu X, He Y, Jin L, Liu Y, Shen Y, Sun W, Wang H, Wang Y, Wang Y, Xiong X, Xu L, Chinese University of Hong Kong L, Waye MM, Tsui SK, Hong Kong University of Science and Technology SK, Xue H, Tze-Fei Wong J, Illumina J, Galver LM, Fan JB, Gunderson K, Murray SS, Oliphant AR, Chee MS, McGill University and Génome Québec Innovation Centre MS, Montpetit A, Chagnon F, Ferretti V, Leboeuf M, Olivier JF, Phillips MS, Roumy S, Sallée C, Verner A, Hudson TJ, University of California at San Francisco and Washington University TJ, Kwok PY, Cai D, Koboldt DC, Miller RD, Pawlikowska L, Taillon-Miller P, Xiao M, University of Hong Kong M, Tsui LC, Mak W, Qiang Song Y, Tam PK, University of Tokyo and RIKEN PK, Nakamura Y, Kawaguchi T, Kitamoto T, Morizono T, Nagashima A, Ohnishi Y, Sekine A, Tanaka T, Tsunoda T, Wellcome Trust Sanger Institute T, Deloukas P, Bird CP, Delgado M, Dermitzakis ET, Gwilliam R, Hunt S, Morrison J, Powell D, Stranger BE, Whittaker P, Bentley DR, Analysis groups: Broad Institute DR, Daly MJ, de Bakker PI, Barrett J, Chretien YR, Maller J, McCarroll S, Patterson N, Pe'er I, Price A, Purcell S, Richter DJ, Sabeti P, Saxena R, Schaffner SF, Sham PC, Varilly P, Altshuler D, Cold Spring Harbor Laboratory D, Stein LD, Krishnan L, Vernon Smith A, Tello-Ruiz MK, Thorisson GA, Johns Hopkins University School of Medicine GA, Chakravarti A, Chen PE, Cutler DJ, Kashuk CS, Lin S, University of Michigan S, Abecasis GR, Guan W, Li Y, Munro HM, Qin ZS, Thomas DJ, University of Oxford DJ, McVean G, Auton A, Bottolo L, Cardin N, Eyheramendy S, Freeman C, Marchini J, Myers S, Spencer C, Stephens M, Donnelly P, University of Oxford, Wellcome Trust Centre for Human Genetics P, Cardon LR, Clarke G, Evans DM, Morris AP, Weir BS, RIKEN BS, Tsunoda T, Johnson TA, US National Institutes of Health TA, Mullikin JC, US National Institutes of Health National Center for Biotechnology Information JC, Sherry ST, Feolo M, Skol A, Community engagement/public consultation and sample collection groups: Beijing Normal University and Beijing Genomics Institute A, Zhang H, Zeng C, Zhao H, Health Sciences University of Hokkaido, Eubios Ethics Institute and Shinshu University H, Matsuda I, Fukushima Y, Macer DR, Suda E, Howard University and University of Ibadan E, Rotimi CN, Adebamowo CA, Ajayi I, Aniagwu T, Marshall PA, Nkwodimmah C, Royal CD, University of Utah CD, Leppert MF, Dixon M, Peiffer A, Ethical, legal and social issues: Chinese Academy of Social Sciences A, Qiu R, Genetic Interest Group R, Kent A, Kyoto University A, Kato K, Nagasaki University K, Niikawa N, University of Ibadan School of Medicine N, Adewole IF, University of Montréal IF, Knoppers BM, University of Oklahoma BM, Foster MW, Vanderbilt University MW, Clayton EW, Wellcome Trust EW, Watkin J, SNP discovery: Baylor College of Medicine J, Gibbs RA, Belmont JW, Muzny D, Nazareth L, Sodergren E, Weinstock GM, Wheeler DA, Yakub I, Broad Institute of Harvard and Massachusetts Institute of Technology I, Gabriel SB, Onofrio RC, Richter DJ, Ziaugra L, Birren BW, Daly MJ, Altshuler D, Washington University D, Wilson RK, Fulton LL, Wellcome Trust Sanger Institute LL, Rogers J, Burton J, Carter NP, Clee CM, Griffiths M, Jones MC, McLay K, Plumb RW, Ross MT, Sims SK, Willey DL, Scientific management: Chinese Academy of Sciences DL, Chen Z, Han H, Kang L, Genome Canada L, Godbout M, Wallenburg JC, Génome Québec JC, L'archevêque P, Bellemare G, Japanese Ministry of Education, Culture, Sports, Science and Technology G, Saeki K, Ministry of Science and Technology of the People’s Republic of China K, Wang H, An D, Fu H, Li Q, Wang Z, The Human Genetic Resource Administration of China Z, Wang R, The SNP Consortium R, Holden AL, US National Institutes of Health AL, Brooks LD, McEwen JE, Guyer MS, Ota Wang V, Peterson JL, Shi M, Spiegel J, Sung LM, Zacharia LF, Collins FS, Wellcome Trust FS, Kennedy K, Jamieson R, Stewart J, Genome-wide detection and characterization of positive selection in human populations Nature449:913-918 2007
PubMed ID: 17943131
 
Broderick P, Carvajal-Carmona L, Pittman AM, Webb E, Howarth K, Rowan A, Lubbe S, Spain S, Sullivan K, Fielding S, Jaeger E, Vijayakrishnan J, Kemp Z, Gorman M, Chandler I, Papaemmanuil E, Penegar S, Wood W, Sellick G, Qureshi M, Teixeira A, Domingo E, Barclay E, Martin L, Sieber O, CORGI Consortium O, Kerr D, Gray R, Peto J, Cazier JB, Tomlinson I, Houlston RS, A genome-wide association study shows that common alleles of SMAD7 influence colorectal cancer risk Nature genetics39:1315-7 2007
PubMed ID: 17934461
 
Chen WM, Abecasis GR, Family-based association tests for genomewide association scans American journal of human genetics81:913-26 2007
PubMed ID: 17924335
 
Christoforou A, Le Hellard S, Thomson PA, Morris SW, Tenesa A, Pickard BS, Wray NR, Muir WJ, Blackwood DH, Porteous DJ, Evans KL, Association analysis of the chromosome 4p15-p16 candidate region for bipolar disorder and schizophrenia Molecular psychiatry12:1011-25 2007
PubMed ID: 17457313
 
Crespi B, Summers K, Dorus S, Adaptive evolution of genes underlying schizophrenia Proceedings Biological sciences / The Royal Society274:2801-10 2007
PubMed ID: 17785269
 
Buch S, Schafmayer C, Völzke H, Becker C, Franke A, von Eller-Eberstein H, Kluck C, Bässmann I, Brosch M, Lammert F, Miquel JF, Nervi F, Wittig M, Rosskopf D, Timm B, Höll C, Seeger M, Elsharawy A, Lu T, Egberts J, Fändrich F, Fölsch UR, Krawczak M, Schreiber S, Nürnberg P, Tepel J, Hampe J, A genome-wide association scan identifies the hepatic cholesterol transporter ABCG8 as a susceptibility factor for human gallstone disease Nature Genetics39:995-999 2007
PubMed ID: 17632509
 
Chen H, Green RE, Paabo S, Slatkin M, The Allele-Frequency Spectrum Conditioned on Information from a Closely-Related Species Genetics177(1):387-98 2007
PubMed ID: 17603120
 
Cheng C Y, Tang L S, Yeung HY, Miller N, Genetic Association of Complex Traits: Using Idiopathic Scoliosis as an Example Clin Orthop Relat Res462:38-44 2007
PubMed ID: 17534191
 
Delaneau O, Coulonges C, Boelle PY, Nelson G, Spadoni JL, Zagury JF, ISHAPE: new rapid and accurate software for haplotyping BMC bioinformatics8:205 2007
PubMed ID: 17573965
 
Diabetes Genetics Initiative of Broad Institute of Harvard and MIT, Lund University, and Novartis Institutes of BioMedical Research , Saxena R, Voight BF, Lyssenko V, Burtt NP, de Bakker PI, Chen H, Roix JJ, Kathiresan S, Hirschhorn JN, Daly MJ, Hughes TE, Groop L, Altshuler D, Almgren P, Florez JC, Meyer J, Ardlie K, Bengtsson Boström K, Isomaa B, Lettre G, Lindblad U, Lyon HN, Melander O, Newton-Cheh C, Nilsson P, Orho-Melander M, Råstam L, Speliotes EK, Taskinen MR, Tuomi T, Guiducci C, Berglund A, Carlson J, Gianniny L, Hackett R, Hall L, Holmkvist J, Laurila E, Sjögren M, Sterner M, Surti A, Svensson M, Svensson M, Tewhey R, Blumenstiel B, Parkin M, Defelice M, Barry R, Brodeur W, Camarata J, Chia N, Fava M, Gibbons J, Handsaker B, Healy C, Nguyen K, Gates C, Sougnez C, Gage D, Nizzari M, Gabriel SB, Chirn GW, Ma Q, Parikh H, Richardson D, Ricke D, Purcell S, Genome-wide association analysis identifies loci for type 2 diabetes and triglyceride levels Science316:1331-6 2007
PubMed ID: 17463246
 
Douglas JA, Levin AM, Zuhlke KA, Ray AM, Johnson GR, Lange EM, Wood DP, Cooney KA, Common variation in the BRCA1 gene and prostate cancer risk Cancer epidemiology, biomarkers & prevention16:1510-6 2007
PubMed ID: 17585057
 
Easton DF, Pooley KA, Dunning AM, Pharoah PD, Thompson D, Ballinger DG, Struewing JP, Morrison J, Field H, Luben R, Wareham N, Ahmed S, Healey CS, Bowman R, SEARCH collaborators R, Meyer KB, Haiman CA, Kolonel LK, Henderson BE, Le Marchand L, Brennan P, Sangrajrang S, Gaborieau V, Odefrey F, Shen CY, Wu PE, Wang HC, Eccles D, Evans DG, Peto J, Fletcher O, Johnson N, Seal S, Stratton MR, Rahman N, Chenevix-Trench G, Bojesen SE, Nordestgaard BG, Axelsson CK, Garcia-Closas M, Brinton L, Chanock S, Lissowska J, Peplonska B, Nevanlinna H, Fagerholm R, Eerola H, Kang D, Yoo KY, Noh DY, Ahn SH, Hunter DJ, Hankinson SE, Cox DG, Hall P, Wedren S, Liu J, Low YL, Bogdanova N, Schürmann P, Dörk T, Tollenaar RA, Jacobi CE, Devilee P, Klijn JG, Sigurdson AJ, Doody MM, Alexander BH, Zhang J, Cox A, Brock IW, MacPherson G, Reed MW, Couch FJ, Goode EL, Olson JE, Meijers-Heijboer H, van den Ouweland A, Uitterlinden A, Rivadeneira F, Milne RL, Ribas G, Gonzalez-Neira A, Benitez J, Hopper JL, McCredie M, Southey M, Giles GG, Schroen C, Justenhoven C, Brauch H, Hamann U, Ko YD, Spurdle AB, Beesley J, Chen X, kConFab X, AOCS Management Group X, Mannermaa A, Kosma VM, Kataja V, Hartikainen J, Day NE, Cox DR, Ponder BA, Genome-wide association study identifies novel breast cancer susceptibility loci Nature447:1087-93 2007
PubMed ID: 17529967
 
Feigelson HS, Rodriguez C, Welch R, Hutchinson A, Shao W, Jacobs K, Diver WR, Calle EE, Thun MJ, Hunter DJ, Thomas G, Chanock SJ, Successful genome-wide scan in paired blood and buccal samples Cancer epidemiology, biomarkers & prevention16:1023-5 2007
PubMed ID: 17507632
 
Freudenberg J, Fu YH, Ptá Cbreve Ek LJ, Enrichment of HapMap recombination hotspot predictions around human nervous system genes: evidence for positive selection ? Eur J Hum Genet15(10):1071-8 2007
PubMed ID: 17568387
 
Freudenberg J, Fu YH, Ptácek LJ, Human recombination rates are increased around accelerated conserved regions--evidence for continued selection? Bioinformatics (Oxford, England)23:1441-3 2007
PubMed ID: 17463031
 
Hunter DJ, Kraft P, Jacobs KB, Cox DG, Yeager M, Hankinson SE, Wacholder S, Wang Z, Welch R, Hutchinson A, Wang J, Yu K, Chatterjee N, Orr N, Willett WC, Colditz GA, Ziegler RG, Berg CD, Buys SS, McCarty CA, Feigelson HS, Calle EE, Thun MJ, Hayes RB, Tucker M, Gerhard DS, Fraumeni JF, Hoover RN, Thomas G, Chanock SJ, A genome-wide association study identifies alleles in FGFR2 associated with risk of sporadic postmenopausal breast cancer Nature genetics39:870-4 2007
PubMed ID: 17529973
 
Johansson A, Vavruch-Nilsson V, Cox DR, Frazer KA, Gyllensten U, Evaluation of the SNP tagging approach in an independent population sample-array-based SNP discovery in Sami Human genetics122:141-50 2007
PubMed ID: 17554563
 
King TM, Au KS, Kirkpatrick TJ, Davidson C, Fletcher JM, Townsend I, Tyerman GH, Shimmin LC, Northrup H, The Impact of BRCA1 on Spina Bifida Meningomyelocele Lesions Ann Hum Genet71(Pt6):719-28 2007
PubMed ID: 17640328
 
Klitø NG, Tan Q, Nyegaard M, Brusgaard K, Thomassen M, Skouboe C, Dahlgaard J, Kruse TA, Arrayed primer extension in the "array of arrays" format: a rational approach for microarray-based SNP genotyping Genetic testing11:160-6 2007
PubMed ID: 17627387
 
Kullo IJ, Ding K, Patterns of population differentiation of candidate genes for cardiovascular disease BMC genetics8:48 2007
PubMed ID: 17626638
 
Leak TS, Keene KL, Langefeld CD, Gallagher CJ, Mychaleckyj JC, Freedman BI, Bowden DW, Rich SS, Sale MM, Association of the proprotein convertase subtilisin/kexin-type 2 (PCSK2) gene with type 2 diabetes in an African American population Mol Genet Metab92(1-2):145-50 2007
PubMed ID: 17618154
 
Lie BA, Viken MK, Akselsen HE, Flåm ST, Pociot F, Nerup J, Kockum I, Cambon-Thomsen A, Thorsby E, Undlien DE, Association analysis in type 1 diabetes of the PRSS16 gene encoding a thymus-specific serine protease Human immunology68:592-8 2007
PubMed ID: 17584581
 
Mägi R, Pfeufer A, Nelis M, Montpetit A, Metspalu A, Remm M, Evaluating the performance of commercial whole-genome marker sets for capturing common genetic variation BMC genomics8:159 2007
PubMed ID: 17562002
 
Marchini J, Howie B, Myers S, McVean G, Donnelly P, A new multipoint method for genome-wide association studies by imputation of genotypes Nature genetics39:906-13 2007
PubMed ID: 17572673
 
Marvelle F, Lange A, Qin L, Wang Y, Lange M, Adair S, Mohlke L, Comparison of ENCODE region SNPs between Cebu Filipino and Asian HapMap samples Journal of Human Genetics52(9):729-37 2007
PubMed ID: 17636361
 
Matarín M, Brown WM, Scholz S, Simón-Sánchez J, Fung HC, Hernandez D, Gibbs JR, De Vrieze FW, Crews C, Britton A, Langefeld CD, Brott TG, Brown RD, Worrall BB, Frankel M, Silliman S, Case LD, Singleton A, Hardy JA, Rich SS, Meschia JF, A genome-wide genotyping study in patients with ischaemic stroke: initial analysis and data release Lancet neurology6:414-20 2007
PubMed ID: 17434096
 
McPherson R, Pertsemlidis A, Kavaslar N, Stewart A, Roberts R, Cox DR, Hinds DA, Pennacchio LA, Tybjaerg-Hansen A, Folsom AR, Boerwinkle E, Hobbs HH, Cohen JC, A common allele on chromosome 9 associated with coronary heart disease Science316:1488-91 2007
PubMed ID: 17478681
 
Moffatt MF, Kabesch M, Liang L, Dixon AL, Strachan D, Heath S, Depner M, von Berg A, Bufe A, Rietschel E, Heinzmann A, Simma B, Frischer T, Willis-Owen SA, Wong KC, Illig T, Vogelberg C, Weiland SK, von Mutius E, Abecasis GR, Farrall M, Gut IG, Lathrop GM, Cookson WO, Genetic variants regulating ORMDL3 expression contribute to the risk of childhood asthma Nature448:470-3 2007
PubMed ID: 17611496
 
Ohnishi T, Yamada K, Ohba H, Iwayama Y, Toyota T, Hattori E, Inada T, Kunugi H, Tatsumi M, Ozaki N, Iwata N, Sakamoto K, Iijima Y, Iwata Y, Tsuchiya KJ, Sugihara G, Nanko S, Osumi N, Detera-Wadleigh SD, Kato T, Yoshikawa T, A promoter haplotype of the inositol monophosphatase 2 gene (IMPA2) at 18p112 confers a possible risk for bipolar disorder by enhancing transcription Neuropsychopharmacology32:1727-37 2007
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Zhernakova A, Alizadeh BZ, Bevova M, van Leeuwen MA, Coenen MJ, Franke B, Franke L, Posthumus MD, van Heel DA, van der Steege G, Radstake TR, Barrera P, Roep BO, Koeleman BP, Wijmenga C, Novel association in chromosome 4q27 region with rheumatoid arthritis and confirmation of type 1 diabetes point to a general risk locus for autoimmune diseases American journal of human genetics81:1284-8 2007
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Zhu X, Cooper RS, Admixture Mapping Provides Evidence of Association of the VNN1 Gene with Hypertension PLoS ONE2:e1244 2007
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McCauley JL, Kenealy SJ, Margulies EH, Schnetz-Boutaud N, Gregory SG, Hauser SL, Oksenberg JR, Pericak-Vance MA, Haines JL, Mortlock DP, SNPs in Multi-species Conserved Sequences (MCS) as useful markers in association studies: a practical approach BMC genomics8:266 2007
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Shi J, Hattori E, Zou H, Badner JA, Christian SL, Gershon ES, Liu C, No evidence for association between 19 cholinergic genes and bipolar disorder American journal of medical genetics Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics144:715-23 2007
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Stefansson H, Rye DB, Hicks A, Petursson H, Ingason A, Thorgeirsson TE, Palsson S, Sigmundsson T, Sigurdsson AP, Eiriksdottir I, Soebech E, Bliwise D, Beck JM, Rosen A, Waddy S, Trotti LM, Iranzo A, Thambisetty M, Hardarson GA, Kristjansson K, Gudmundsson LJ, Thorsteinsdottir U, Kong A, Gulcher JR, Gudbjartsson D, Stefansson K, A genetic risk factor for periodic limb movements in sleep The New England journal of medicine357:639-47 2007
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Stokowski RP, Pant PV, Dadd T, Fereday A, Hinds DA, Jarman C, Filsell W, Ginger RS, Green MR, van der Ouderaa FJ, Cox DR, A genomewide association study of skin pigmentation in a South Asian population American journal of human genetics81:1119-32 2007
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van Es MA, Van Vught PW, Blauw HM, Franke L, Saris CG, Andersen PM, Van Den Bosch L, de Jong SW, van 't Slot R, Birve A, Lemmens R, de Jong V, Baas F, Schelhaas HJ, Sleegers K, Van Broeckhoven C, Wokke JH, Wijmenga C, Robberecht W, Veldink JH, Ophoff RA, van den Berg LH, ITPR2 as a susceptibility gene in sporadic amyotrophic lateral sclerosis: a genome-wide association study Lancet neurology6:869-77 2007
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Xu Y, Xue Y, Asan Y, Daly A, Wu L, Tyler-Smith C, Variation of the oxytocin/neurophysin I (OXT) gene in four human populations Journal of human genetics53:637-43 2007
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Cole W, Naj C, O'Connell R, Stine C, Sorkin D, Wozniak A, Stern J, Yepes M, Lawrence A, Reinhart J, Strickland K, Mitchell D, Kittner J, Neuroserpin polymorphisms and stroke risk in a biracial population: the stroke prevention in young women study BMC Neurol7(1):37 2007
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Siitonen N, Pulkkinen L, Mager U, Lindström J, Eriksson JG, Valle TT, Hämäläinen H, Ilanne-Parikka P, Keinänen-Kiukaanniemi S, Tuomilehto J, Laakso M, Uusitupa M, Association of sequence variations in the gene encoding adiponectin receptor 1 (ADIPOR1) with body size and insulin levels The Finnish Diabetes Prevention Study Diabetologia49:1795-805 2006
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Gunderson KL, Kuhn KM, Steemers FJ, Ng P, Murray SS, Shen R, Whole-genome genotyping of haplotype tag single nucleotide polymorphisms Pharmacogenomics7:641-8 2006
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García-Martín E, Martínez C, Ladero JM, Agúndez JA, Interethnic and intraethnic variability of CYP2C8 and CYP2C9 polymorphisms in healthy individuals Molecular diagnosis & therapy10:29-40 2006
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Arnold PD, Sicard T, Burroughs E, Richter MA, Kennedy JL, Glutamate transporter gene SLC1A1 associated with obsessive-compulsive disorder Archives of general psychiatry63:769-76 2006
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Iwamoto T, Ikari K, Nakamura T, Kuwahara M, Toyama Y, Tomatsu T, Momohara S, Kamatani N, Association between PADI4 and rheumatoid arthritis: a meta-analysis Rheumatology (Oxford, England)45:804-7 2006
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Kathiresan S, Yang Q, Larson MG, Camargo AL, Tofler GH, Hirschhorn JN, Gabriel SB, O'Donnell CJ, Common genetic variation in five thrombosis genes and relations to plasma hemostatic protein level and cardiovascular disease risk Arteriosclerosis, thrombosis, and vascular biology26:1405-12 2006
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Lim JE, Papp A, Pinsonneault J, Sadée W, Saffen D, Allelic expression of serotonin transporter (SERT) mRNA in human pons: lack of correlation with the polymorphism SERTLPR Molecular psychiatry11:649-62 2006
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Nicolae DL, Testing untyped alleles (TUNA)-applications to genome-wide association studies Genetic epidemiology30:718-27 2006
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Schadt, EE, Association studies: a genome-wide association approach to mapping the genetic determinants of the transcriptome in human populations. Eur J Hum Genet14(8):891-3 2006
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O'Shaughnessy KM, HapMap, pharmacogenomics, and the goal of personalized prescribing British journal of clinical pharmacology61:783-6 2006
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Andrulionyte L, Peltola P, Chiasson JL, Laakso M, STOP-NIDDM Study Group M, Single nucleotide polymorphisms of PPARD in combination with the Gly482Ser substitution of PGC-1A and the Pro12Ala substitution of PPARG2 predict the conversion from impaired glucose tolerance to type 2 diabetes: the STOP-NIDDM trial Diabetes55:2148-52 2006
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Yu Y, Panhuysen C, Kranzler HR, Hesselbrock V, Rounsaville B, Weiss R, Brady K, Farrer LA, Gelernter J, Intronic variants in the dopa decarboxylase (DDC) gene are associated with smoking behavior in European-Americans and African-Americans Human molecular genetics15:2192-9 2006
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Sabeti PC, Schaffner SF, Fry B, Lohmueller J, Varilly P, Shamovsky O, Palma A, Mikkelsen TS, Altshuler D, Lander ES, Positive natural selection in the human lineage Science312:1614-20 2006
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Pe'er I, de Bakker PI, Maller J, Yelensky R, Altshuler D, Daly MJ, Evaluating and improving power in whole-genome association studies using fixed marker sets Nature genetics38:663-7 2006
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Macgregor S, Visscher PM, Montgomery G, Analysis of pooled DNA samples on high density arrays without prior knowledge of differential hybridization rates Nucleic acids research34:e55 2006
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Nakatani N, Hattori E, Ohnishi T, Dean B, Iwayama Y, Matsumoto I, Kato T, Osumi N, Higuchi T, Niwa S, Yoshikawa T, Genome-wide expression analysis detects eight genes with robust alterations specific to bipolar I disorder: relevance to neuronal network perturbation Human molecular genetics15:1949-62 2006
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Min JL, Meulenbelt I, Riyazi N, Kloppenburg M, Houwing-Duistermaat JJ, Seymour AB, van Duijn CM, Slagboom PE, Association of matrilin-3 polymorphisms with spinal disc degeneration and osteoarthritis of the first carpometacarpal joint of the hand Annals of the rheumatic diseases65:1060-6 2006
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Carlson CS, Agnosticism and equity in genome-wide association studies Nature genetics38:605-6 2006
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Barrett JC, Cardon LR, Evaluating coverage of genome-wide association studies Nature genetics38:659-62 2006
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Arking DE, Pfeufer A, Post W, Kao WH, Newton-Cheh C, Ikeda M, West K, Kashuk C, Akyol M, Perz S, Jalilzadeh S, Illig T, Gieger C, Guo CY, Larson MG, Wichmann HE, Marbán E, O'Donnell CJ, Hirschhorn JN, Kääb S, Spooner PM, Meitinger T, Chakravarti A, A common genetic variant in the NOS1 regulator NOS1AP modulates cardiac repolarization Nature genetics38:644-51 2006
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McPartland JM, Norris RW, Kilpatrick CW, Tempo and mode in the endocannaboinoid system Journal of molecular evolution65:267-76 2006
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Howie BN, Carlson CS, Rieder MJ, Nickerson DA, Efficient selection of tagging single-nucleotide polymorphisms in multiple populations Human genetics120:58-68 2006
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Locke DP, Sharp AJ, McCarroll SA, McGrath SD, Newman TL, Cheng Z, Schwartz S, Albertson DG, Pinkel D, Altshuler DM, Eichler EE, Linkage disequilibrium and heritability of copy-number polymorphisms within duplicated regions of the human genome American journal of human genetics79:275-90 2006
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Rioux JD, Xavier RJ, Taylor KD, Silverberg MS, Goyette P, Huett A, Green T, Kuballa P, Barmada MM, Datta LW, Shugart YY, Griffiths AM, Targan SR, Ippoliti AF, Bernard EJ, Mei L, Nicolae DL, Regueiro M, Schumm LP, Steinhart AH, Rotter JI, Duerr RH, Cho JH, Daly MJ, Brant SR, Genome-wide association study identifies new susceptibility loci for Crohn disease and implicates autophagy in disease pathogenesis Nature genetics39:596-604 2006
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Gao X, Starmer J, Human population structure detection via multilocus genotype clustering BMC genetics8:34 2006
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Saccone SF, Rice JP, Saccone NL, Power-based, phase-informed selection of single nucleotide polymorphisms for disease association screens Genetic epidemiology30:459-70 2006
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Plenge R, Rioux JD, Identifying susceptibility genes for immunological disorders: patterns, power, and proof Immunological reviews210:40-51 2006
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Spinola M, Meyer P, Kammerer S, Falvella FS, Boettger MB, Hoyal CR, Pignatiello C, Fischer R, Roth RB, Pastorino U, Haeussinger K, Nelson MR, Dierkesmann R, Dragani TA, Braun A, Association of the PDCD5 locus with lung cancer risk and prognosis in smokers Journal of clinical oncology : official journal of the American Society of Clinical Oncology24:1672-8 2006
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Sun MW, Lee JY, de Bakker PI, Burtt NP, Almgren P, Råstam L, Tuomi T, Gaudet D, Daly MJ, Hirschhorn JN, Altshuler D, Groop L, Florez JC, Haplotype structures and large-scale association testing of the 5' AMP-activated protein kinase genes PRKAA2, PRKAB1, and PRKAB2 [corrected] with type 2 diabetes Diabetes55:849-55 2006
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Weigmann K, Racial medicine: here to stay? The success of the International HapMap Project and other initiatives may help to overcome racial profiling in medicine, but old habits die hard EMBO reports7:246-9 2006
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Williams NM, Green EK, Macgregor S, Dwyer S, Norton N, Williams H, Raybould R, Grozeva D, Hamshere M, Zammit S, Jones L, Cardno A, Kirov G, Jones I, O'Donovan MC, Owen MJ, Craddock N, Variation at the DAOA/G30 locus influences susceptibility to major mood episodes but not psychosis in schizophrenia and bipolar disorder Archives of general psychiatry63:366-73 2006
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Newman TL, Rieder MJ, Morrison VA, Sharp AJ, Smith JD, Sprague LJ, Kaul R, Carlson CS, Olson MV, Nickerson DA, Eichler EE, High-throughput genotyping of intermediate-size structural variation Human molecular genetics15:1159-67 2006
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Pastinen T, Ge B, Hudson TJ, Influence of human genome polymorphism on gene expression Human molecular genetics15 Spec No 1:R9-16 2006
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Dixon AL, Liang L, Moffatt MF, Chen W, Heath S, Wong KC, Taylor J, Burnett E, Gut I, Farrall M, Lathrop GM, Abecasis GR, Cookson WO, A genome-wide association study of global gene expression Nature genetics39:1202-7 2006
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Tang K, Thornton KR, Stoneking M, A New Approach for Using Genome Scans to Detect Recent Positive Selection in the Human Genome PLoS Biol5:e171 2006
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Hull J, Campino S, Rowlands K, Chan MS, Copley RR, Taylor MS, Rockett K, Elvidge G, Keating B, Knight J, Kwiatkowski D, Identification of common genetic variation that modulates alternative splicing PLoS genetics3:e99 2006
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Bibikova M, Chudin E, Arsanjani A, Zhou L, Garcia EW, Modder J, Kostelec M, Barker D, Downs T, Fan JB, Wang-Rodriguez J, Expression signatures that correlated with Gleason score and relapse in prostate cancer Genomics89:666-72 2006
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Kim KS, Kim GS, Hwang JY, Lee HJ, Park MH, Kim KJ, Jung J, Cha HS, Shin HD, Kang JH, Park EK, Kim TH, Hong JM, Koh JM, Oh B, Kimm K, Kim SY, Lee JY, Single nucleotide polymorphisms in bone turnover-related genes in Koreans: Ethnic differences in linkage disequilibrium and haplotype BMC Med Genet8(1):70 2006
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Tang F, Qu M, Wang L, Ruan Y, Lu T, Zhang H, Liu Z, Yue W, Zhang D, Case-control association study of the 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP) gene and schizophrenia in the Han Chinese population Neuroscience letters416:113-6 2006
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Florez JC, Wiltshire S, Agapakis CM, Burtt NP, de Bakker PI, Almgren P, Bengtsson Bostrom K, Tuomi T, Gaudet D, Daly MJ, Hirschhorn JN, McCarthy MI, Altshuler D, Groop L, High-density haplotype structure and association testing of the insulin-degrading enzyme (IDE) gene with type 2 diabetes in 4,206 people. Diabetes55(1):128-35 2006
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Storey JD, Madeoy J, Strout JL, Wurfel M, Ronald J, Akey JM, Gene-expression variation within and among human populations American journal of human genetics80:502-9 2006
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Spielman RS, Bastone LA, Burdick JT, Morley M, Ewens WJ, Cheung VG, Common genetic variants account for differences in gene expression among ethnic groups Nature genetics39:226-31 2006
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Greenawalt DM, Cui X, Wu Y, Lin Y, Wang HY, Luo M, Tereshchenko IV, Hu G, Li JY, Chu Y, Azaro MA, Decoste CJ, Chimge NO, Gao R, Shen L, Shih WJ, Lange K, Li H, Strong correlation between meiotic crossovers and haplotype structure in a 2.5-Mb region on the long arm of chromosome 21. Genome Res16(2):208-14 2006
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Ribas G, Gonzalez-Neira A, Salas A, Milne RL, Vega A, Carracedo B, Gonzalez E, Barroso E, Fernandez LP, Yankilevich P, Robledo M, Carracedo A, Benitez J., Evaluating HapMap SNP data transferability in a large-scale genotyping project involving 175 cancer-associated genes. Hum Genet118(6):669-79 2006
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Stankovich J, Cox CJ, Tan RB, Montgomery DS, Huxtable SJ, Rubio JP, Ehm MG, Johnson L, Butzkueven H, Kilpatrick TJ, Speed TP, Roses AD, Bahlo M, Foote SJ, On the utility of data from the International HapMap Project for Australian association studies. Hum Genet119(1-2):220-2 2006
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Steemers FJ, Chang W, Lee G, Barker DL, Shen R, Gunderson KL, Whole-genome genotyping with the single-base extension assay. Nat Methods3(1):31-3 2006
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Conrad DF, Andrews TD, Carter NP, Hurles ME, Pritchard JK, A high-resolution survey of deletion polymorphism in the human genome. Nat Genet38(1):75-81 2006
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Helgadottir A, Manolescu A, Helgason A, Thorleifsson G, Thorsteinsdottir U, Gudbjartsson DF, Gretarsdottir S, Magnusson KP, Gudmundsson G, Hicks A, Jonsson T, Grant SF, Sainz J, O'Brien SJ, Sveinbjornsdottir S, Valdimarsson EM, Matthiasson SE, Levey AI, Abramson JL, Reilly MP, Vaccarino V, Wolfe ML, Gudnason V, Quyyumi AA, Topol EJ, Rader DJ, Thorgeirsson G, Gulcher JR, Hakonarson H, Kong A, Stefansson K, A variant of the gene encoding leukotriene A4 hydrolase confers ethnicity-specific risk of myocardial infarction. Nat Genet38(1):68-74 2006
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Silberberg G, Darvasi A, Pinkas-Kramarski R, Navon R, The involvement of ErbB4 with schizophrenia: association and expression studies. Am J Med Genet B Neuropsychiatr Genet141(2):142-8 2006
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Garcia-Barcelo M, So MT, Lau DK, Leon TY, Yuan ZW, Cai WS, Lui VC, Fu M, Herbrick JA, Gutter E, Proud V, Li L, Pierre-Louis J, Aleck K, van Heurn E, Belloni E, Scherer SW, Tam PK, Population differences in the polyalanine domain and 6 new mutations in HLXB9 in patients with Currarino syndrome. Clin Chem52(1):46-52 2006
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Ireland J, Carlton VE, Falkowski M, Moorhead M, Tran K, Useche F, Hardenbol P, Erbilgin A, Fitzgerald R, Willis TD, Faham M, Large-scale characterization of public database SNPs causing non-synonymous changes in three ethnic groups. Hum Genet119(1-2):75-83 2006
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Taylor JA, Xu ZL, Kaplan NL, Morris RW, How well do HapMap haplotypes identify common haplotypes of genes? A comparison with haplotypes of 334 genes resequenced in the environmental genome project. Cancer Epidemiol Biomarkers Prev15(1):133-7 2006
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Zhu H, Yang W, Lu W, Zhang J, Shaw GM, Lammer EJ, Finnell RH, A known functional polymorphism (Ile120Val) of the human PCMT1 gene and risk of spina bifida. Mol Genet Metab87(1):66-70 2006
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Auro K, Komulainen K, Alanne M, Silander K, Peltonen L, Perola M, Salomaa V, Thrombomodulin gene polymorphisms and haplotypes and the risk of cardiovascular events: a prospective follow-up study Arteriosclerosis, thrombosis, and vascular biology26:942-7 2006
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Herbert A, Gerry NP, McQueen MB, Heid IM, Pfeufer A, Illig T, Wichmann HE, Meitinger T, Hunter D, Hu FB, Colditz G, Hinney A, Hebebrand J, Koberwitz K, Zhu X, Cooper R, Ardlie K, Lyon H, Hirschhorn JN, Laird NM, Lenburg ME, Lange C, Christman MF, A common genetic variant is associated with adult and childhood obesity Science312:279-83 2006
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Kathiresan S, Larson MG, Vasan RS, Guo CY, Gona P, Keaney JF, Wilson PW, Newton-Cheh C, Musone SL, Camargo AL, Drake JA, Levy D, O'Donnell CJ, Hirschhorn JN, Benjamin EJ, Contribution of clinical correlates and 13 C-reactive protein gene polymorphisms to interindividual variability in serum C-reactive protein level Circulation113:1415-23 2006
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Yeager M, Orr N, Hayes RB, Jacobs KB, Kraft P, Wacholder S, Minichiello MJ, Fearnhead P, Yu K, Chatterjee N, Wang Z, Welch R, Staats BJ, Calle EE, Feigelson HS, Thun MJ, Rodriguez C, Albanes D, Virtamo J, Weinstein S, Schumacher FR, Giovannucci E, Willett WC, Cancel-Tassin G, Cussenot O, Valeri A, Andriole GL, Gelmann EP, Tucker M, Gerhard DS, Fraumeni JF, Hoover R, Hunter DJ, Chanock SJ, Thomas G, Genome-wide association study of prostate cancer identifies a second risk locus at 8q24 Nature Genetics39:645-649 2006
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Yu CE, Seltman H, Peskind ER, Galloway N, Zhou PX, Rosenthal E, Wijsman EM, Tsuang DW, Devlin B, Schellenberg GD, Comprehensive analysis of APOE and selected proximate markers for late-onset Alzheimer's disease: Patterns of linkage disequilibrium and disease/marker association Genomics89:655-665 2006
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Zaitlen N, Kang HM, Eskin E, Halperin E, Leveraging the HapMap correlation structure in association studies American journal of human genetics80:683-91 2006
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McCarroll SA, Hadnott TN, Perry GH, Sabeti PC, Zody MC, Barrett JC, Dallaire S, Gabriel SB, Lee C, Daly MJ, Altshuler DM; International HapMap Consortium., Common deletion polymorphisms in the human genome. Nat Genet38(1):86-92 2006
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Marchini J, Cutler D, Patterson N, Stephens M, Eskin E, Halperin E, Lin S, Qin ZS, Munro HM, Abecasis GR, Donnelly P; International HapMap Consortium., A comparison of phasing algorithms for trios and unrelated individuals. Am J Hum Genet78(3):437-50 2006
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Skelding KA, Gerhard GS, Simari RD, Holmes DR, The effect of HapMap on cardiovascular research and clinical practice Nature clinical practice Cardiovascular medicine4:136-42 2006
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Sladek R, Rocheleau G, Rung J, Dina C, Shen L, Serre D, Boutin P, Vincent D, Belisle A, Hadjadj S, Balkau B, Heude B, Charpentier G, Hudson TJ, Montpetit A, Pshezhetsky AV, Prentki M, Posner BI, Balding DJ, Meyre D, Polychronakos C, Froguel P, A genome-wide association study identifies novel risk loci for type 2 diabetes Nature445:881-5 2006
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Pharoah PD, Tyrer J, Dunning AM, Easton DF, Ponder BA, SEARCH Investigators BA, Association between Common Variation in 120 Candidate Genes and Breast Cancer Risk PLoS Genet3:e42 2006
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Lanfear DE, Stolker JM, Marsh S, Rich MW, McLeod HL, Genetic Variation in the B-Type Natiuretic Peptide Pathway Affects BNP Levels Cardiovascular drugs and therapy / sponsored by the International Society of Cardiovascular Pharmacotherapy21:55-62 2006
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Kimura R, Fujimoto A, Tokunaga K, Ohashi J, A practical genome scan for population-specific strong selective sweeps that have reached fixation PLoS ONE2:e286 2006
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Jacob S, Brune CW, Carter CS, Leventhal BL, Lord C, Cook EH, Association of the oxytocin receptor gene (OXTR) in Caucasian children and adolescents with autism Neuroscience letters417:6-9 2006
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Grarup N, Albrechtsen A, Ek J, Borch-Johnsen K, Jørgensen T, Schmitz O, Hansen T, Pedersen O, Variation in the peroxisome proliferator-activated receptor delta gene in relation to common metabolic traits in 7,495 middle-aged white people Diabetologia50:1201-8 2006
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Gudmundsson J, Sulem P, Manolescu A, Amundadottir LT, Gudbjartsson D, Helgason A, Rafnar T, Bergthorsson JT, Agnarsson BA, Baker A, Sigurdsson A, Benediktsdottir KR, Jakobsdottir M, Xu J, Blondal T, Kostic J, Sun J, Ghosh S, Stacey SN, Mouy M, Saemundsdottir J, Backman VM, Kristjansson K, Tres A, Partin AW, Albers-Akkers MT, Godino-Ivan Marcos J, Walsh PC, Swinkels DW, Navarrete S, Isaacs SD, Aben KK, Graif T, Cashy J, Ruiz-Echarri M, Wiley KE, Suarez BK, Witjes JA, Frigge M, Ober C, Jonsson E, Einarsson GV, Mayordomo JI, Kiemeney LA, Isaacs WB, Catalona WJ, Barkardottir RB, Gulcher JR, Thorsteinsdottir U, Kong A, Stefansson K, Genome-wide association study identifies a second prostate cancer susceptibility variant at 8q24 Nature genetics39:631-7 2006
PubMed ID: 17401366
 
Haiman CA, Patterson N, Freedman ML, Myers SR, Pike MC, Waliszewska A, Neubauer J, Tandon A, Schirmer C, McDonald GJ, Greenway SC, Stram DO, Le Marchand L, Kolonel LN, Frasco M, Wong D, Pooler LC, Ardlie K, Oakley-Girvan I, Whittemore AS, Cooney KA, John EM, Ingles SA, Altshuler D, Henderson BE, Reich D, Multiple regions within 8q24 independently affect risk for prostate cancer Nature genetics39:638-44 2006
PubMed ID: 17401364
 
Duerr RH, Taylor KD, Brant SR, Rioux JD, Silverberg MS, Daly MJ, Steinhart AH, Abraham C, Regueiro M, Griffiths A, Dassopoulos T, Bitton A, Yang H, Targan S, Datta LW, Kistner EO, Schumm LP, Lee AT, Gregersen PK, Barmada MM, Rotter JI, Nicolae DL, Cho JH, A genome-wide association study identifies IL23R as an inflammatory bowel disease gene Science314:1461-3 2006
PubMed ID: 17068223
 
Fearnhead P, SequenceLDhot: detecting recombination hotspots Bioinformatics (Oxford, England)22:3061-6 2006
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Forton JT, Kwiatkowski DP, Searching for the regulators of human gene expression BioEssays : news and reviews in molecular, cellular and developmental biology28:968-72 2006
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Gibbs JR, Singleton A, Application of genome-wide single nucleotide polymorphism typing: simple association and beyond PLoS genetics2:e150 2006
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Grassi MA, Fingert JH, Scheetz TE, Roos BR, Ritch R, West SK, Kawase K, Shire AM, Mullins RF, Stone EM, Ethnic variation in AMD-associated complement factor H polymorphism pTyr402His Human mutation27:921-5 2006
PubMed ID: 16865697
 
Groves CJ, Zeggini E, Minton J, Frayling TM, Weedon MN, Rayner NW, Hitman GA, Walker M, Wiltshire S, Hattersley AT, McCarthy MI, Association analysis of 6,736 UK subjects provides replication and confirms TCF7L2 as a type 2 diabetes susceptibility gene with a substantial effect on individual risk Diabetes55:2640-4 2006
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Grunau C, Buard J, Brun ME, De Sario A, Mapping of the juxtacentromeric heterochromatin-euchromatin frontier of human chromosome 21 Genome research16:1198-207 2006
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He J, Zelikovsky A, MLR-tagging: informative SNP selection for unphased genotypes based on multiple linear regression Bioinformatics (Oxford, England)22:2558-61 2006
PubMed ID: 16895924
 
Healy DG, Case-control studies in the genomic era: a clinician's guide Lancet neurology5:701-7 2006
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Kinirons P, Cavalleri GL, Singh R, Shahwan A, Acheson JF, Wood NW, Goldstein DB, Sisodiya SM, Doherty CP, Delanty N, A pharmacogenetic exploration of vigabatrin-induced visual field constriction Epilepsy research70:144-52 2006
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Leschziner G, Jorgensen AL, Andrew T, Pirmohamed M, Williamson PR, Marson AG, Coffey AJ, Middleditch C, Rogers J, Bentley DR, Chadwick DW, Balding DJ, Johnson MR, Clinical factors and ABCB1 polymorphisms in prediction of antiepileptic drug response: a prospective cohort study Lancet neurology5:668-76 2006
PubMed ID: 16857572
 
Li J, Zhang MQ, Zhang X, A new method for detecting human recombination hotspots and its applications to the HapMap ENCODE data American journal of human genetics79:628-39 2006
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Mahasirimongkol S, Chantratita W, Promso S, Pasomsab E, Jinawath N, Jongjaroenprasert W, Lulitanond V, Krittayapoositpot P, Tongsima S, Sawanpanyalert P, Kamatani N, Nakamura Y, Sura T, Similarity of the allele frequency and linkage disequilibrium pattern of single nucleotide polymorphisms in drug-related gene loci between Thai and northern East Asian populations: implications for tagging SNP selection in Thais Journal of human genetics51:896-904 2006
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de Bakker PI, Burtt NP, Graham RR, Guiducci C, Yelensky R, Drake JA, Bersaglieri T, Penney KL, Butler J, Young S, Onofrio RC, Lyon HN, Stram DO, Haiman CA, Freedman ML, Zhu X, Cooper R, Groop L, Kolonel LN, Henderson BE, Daly MJ, Hirschhorn JN, Altshuler D, Transferability of tag SNPs in genetic association studies in multiple populations Nature genetics38:1298-303 2006
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Bataillon T, Mailund T, Thorlacius S, Steingrimsson E, Rafnar T, Halldorsson MM, Calian V, Schierup MH, The effective size of the Icelandic population and the prospects for LD mapping: inference from unphased microsatellite markers European journal of human genetics : EJHG14:1044-53 2006
PubMed ID: 16736029
 
Bonnycastle LL, Willer CJ, Conneely KN, Jackson AU, Burrill CP, Watanabe RM, Chines PS, Narisu N, Scott LJ, Enloe ST, Swift AJ, Duren WL, Stringham HM, Erdos MR, Riebow NL, Buchanan TA, Valle TT, Tuomilehto J, Bergman RN, Mohlke KL, Boehnke M, Collins FS, Common variants in maturity-onset diabetes of the young genes contribute to risk of type 2 diabetes in Finns Diabetes55:2534-40 2006
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Benusiglio PR, Pharoah PD, Smith PL, Lesueur F, Conroy D, Luben RN, Dew G, Jordan C, Dunning A, Easton DF, Ponder BA, HapMap-based study of the 17q21 ERBB2 amplicon in susceptibility to breast cancer British journal of cancer95:1689-95 2006
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Bhangale TR, Stephens M, Nickerson DA, Automating resequencing-based detection of insertion-deletion polymorphisms Nature genetics38:1457-62 2006
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Fung HC, Scholz S, Matarin M, Simón-Sánchez J, Hernandez D, Britton A, Gibbs JR, Langefeld C, Stiegert ML, Schymick J, Okun MS, Mandel RJ, Fernandez HH, Foote KD, Rodríguez RL, Peckham E, De Vrieze FW, Gwinn-Hardy K, Hardy JA, Singleton A, Genome-wide genotyping in Parkinson's disease and neurologically normal controls: first stage analysis and public release of data Lancet neurology5:911-6 2006
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Glinsky GV, Integration of HapMap-based SNP pattern analysis and gene expression profiling reveals common SNP profiles for cancer therapy outcome predictor genes Cell cycle (Georgetown, Tex)5:2613-25 2006
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McEvoy B, Beleza S, Shriver MD, The genetic architecture of normal variation in human pigmentation: an evolutionary perspective and model Human molecular genetics15 Spec No 2:R176-81 2006
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Nyholt DR, ssSNPer: identifying statistically similar SNPs to aid interpretation of genetic association studies Bioinformatics (Oxford, England)22:2960-1 2006
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Scott LJ, Bonnycastle LL, Willer CJ, Sprau AG, Jackson AU, Narisu N, Duren WL, Chines PS, Stringham HM, Erdos MR, Valle TT, Tuomilehto J, Bergman RN, Mohlke KL, Collins FS, Boehnke M, Association of transcription factor 7-like 2 (TCF7L2) variants with type 2 diabetes in a Finnish sample Diabetes55:2649-53 2006
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Tantoso E, Yang Y, Li KB, How well do HapMap SNPs capture the untyped SNPs? BMC genomics7:238 2006
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Thomas DC, Stram DO, An utter refutation of the "Fundamental Theorem of the HapMap" by Terwilliger and Hiekkalinna European journal of human genetics : EJHG14:1238-9 2006
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Van Den Bogaert A, Sleegers K, De Zutter S, Heyrman L, Norrback KF, Adolfsson R, Van Broeckhoven C, Del-Favero J, Association of brain-specific tryptophan hydroxylase, TPH2, with unipolar and bipolar disorder in a Northern Swedish, isolated population Archives of general psychiatry63:1103-10 2006
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Yoo YK, Ke X, Hong S, Jang HY, Park K, Kim S, Ahn T, Lee YD, Song O, Rho NY, Lee MS, Lee YS, Kim J, Kim YJ, Yang JM, Song K, Kimm K, Weir B, Cardon LR, Lee JE, Hwang JJ, Fine-scale map of encyclopedia of DNA elements regions in the Korean population Genetics174:491-7 2006
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Zhang C, Bailey DK, Awad T, Liu G, Xing G, Cao M, Valmeekam V, Retief J, Matsuzaki H, Taub M, Seielstad M, Kennedy GC, A whole genome long-range haplotype (WGLRH) test for detecting imprints of positive selection in human populations Bioinformatics (Oxford, England)22:2122-8 2006
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García-Closas M, Malats N, Real FX, Yeager M, Welch R, Silverman D, Kogevinas M, Dosemeci M, Figueroa J, Chatterjee N, Tardón A, Serra C, Carrato A, García-Closas R, Murta-Nascimento C, Rothman N, Chanock SJ, Large-scale evaluation of candidate genes identifies associations between VEGF polymorphisms and bladder cancer risk PLoS genetics3:e29 2006
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Zheng M, McPeek MS, Multipoint linkage-disequilibrium mapping with haplotype-block structure American journal of human genetics80:112-25 2006
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Allocco DJ, Song Q, Gibbons GH, Ramoni MF, Kohane IS, Geography and genography: prediction of continental origin using randomly selected single nucleotide polymorphisms BMC genomics8:68 2006
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Brown BT, Woerner A, Wilder JA, Ascertainment Bias and the Pattern of Nucleotide Diversity at the Human ALDH2 Locus in a Japanese Population Journal of molecular evolution64:375-85 2006
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Thomas DJ, Trumbower H, Kern AD, Rhead BL, Kuhn RM, Haussler D, Kent WJ, Variation resources at UC Santa Cruz Nucleic acids research35:D716-20 2006
PubMed ID: 17151077
 
Steer S, Abkevich V, Gutin A, Cordell HJ, Gendall KL, Merriman ME, Rodger RA, Rowley KA, Chapman P, Gow P, Harrison AA, Highton J, Jones PB, O'Donnell J, Stamp L, Fitzgerald L, Iliev D, Kouzmine A, Tran T, Skolnick MH, Timms KM, Lanchbury JS, Merriman TR, Genomic DNA pooling for whole-genome association scans in complex disease: empirical demonstration of efficacy in rheumatoid arthritis Genes and immunity8:57-68 2006
PubMed ID: 17159887
 
Simon-Sanchez J, Scholz S, Fung HC, Matarin M, Hernandez D, Gibbs JR, Britton A, de Vrieze FW, Peckham E, Gwinn-Hardy K, Crawley A, Keen JC, Nash J, Borgaonkar D, Hardy J, Singleton A, Genome-wide SNP assay reveals structural genomic variation, extended homozygosity and cell-line induced alterations in normal individuals Human molecular genetics16:1-14 2006
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Song CM, Yeo BH, Tantoso E, Yang Y, Lim YP, Li KB, Rajagopal G, iHAP--integrated haplotype analysis pipeline for characterizing the haplotype structure of genes BMC bioinformatics7:525 2006
PubMed ID: 17137522
 
Komura D, Shen F, Ishikawa S, Fitch KR, Chen W, Zhang J, Liu G, Ihara S, Nakamura H, Hurles ME, Lee C, Scherer SW, Jones KW, Shapero MH, Huang J, Aburatani H, Genome-wide detection of human copy number variations using high-density DNA oligonucleotide arrays Genome research16:1575-84 2006
PubMed ID: 17122084
 
Lau W, Kuo TY, Tapper W, Cox S, Collins A, Exploiting large scale computing to construct high resolution linkage disequilibrium maps of the human genome Bioinformatics (Oxford, England)23:517-9 2006
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Ikari K, Momohara S, Inoue E, Tomatsu T, Hara M, Yamanaka H, Kamatani N, Haplotype analysis revealed no association between the PTPN22 gene and RA in a Japanese population Rheumatology (Oxford, England)45:1345-8 2006
PubMed ID: 16690758
 
Jorgenson E, Witte JS, A gene-centric approach to genome-wide association studies Nature reviews Genetics7:885-91 2006
PubMed ID: 17047687
 
Kato M, Sekine A, Ohnishi Y, Johnson TA, Tanaka T, Nakamura Y, Tsunoda T, Linkage disequilibrium of evolutionarily conserved regions in the human genome BMC genomics7:326 2006
PubMed ID: 17192199
 
Mutsuddi M, Morris DW, Waggoner SG, Daly MJ, Scolnick EM, Sklar P, Analysis of high-resolution HapMap of DTNBP1 (Dysbindin) suggests no consistency between reported common variant associations and schizophrenia American journal of human genetics79:903-9 2006
PubMed ID: 17033966
 
North BV, Sham PC, Knight J, Martin ER, Curtis D, Investigation of the ability of haplotype association and logistic regression to identify associated susceptibility loci Annals of human genetics70:893-906 2006
PubMed ID: 17044864
 
Norton HL, Kittles RA, Parra E, McKeigue P, Mao X, Cheng K, Canfield VA, Bradley DG, McEvoy B, Shriver MD, Genetic evidence for the convergent evolution of light skin in europeans and East asians Molecular biology and evolution24:710-22 2006
PubMed ID: 17182896
 
Park J, Hwang S, Lee YS, Kim SC, Lee D, SNP@Ethnos: a database of ethnically variant single-nucleotide polymorphisms Nucleic acids research35:D711-5 2006
PubMed ID: 17135185
 
Ruigrok YM, Rinkel GJ, van't Slot R, Wolfs M, Tang S, Wijmenga C, Evidence in favor of the contribution of genes involved in the maintenance of the extracellular matrix of the arterial wall to the development of intracranial aneurysms Human molecular genetics15:3361-8 2006
PubMed ID: 17038484
 
Schaid DJ, Batzler AJ, Jenkins GD, Hildebrandt MA, Exact tests of Hardy-Weinberg equilibrium and homogeneity of disequilibrium across strata American journal of human genetics79:1071-80 2006
PubMed ID: 17186465
 
Seixas S, Suriano G, Carvalho F, Seruca R, Rocha J, Di Rienzo A, Sequence Diversity at the Proximal 14q321 SERPIN Subcluster: Evidence for Natural Selection Favoring the Pseudogenization of SERPINA2 Molecular biology and evolution24:587-98 2006
PubMed ID: 17135331
 
Kim KJ, Lee HJ, Park MH, Cha SH, Kim KS, Kim HT, Kimm K, Oh B, Lee JY, SNP identification, linkage disequilibrium, and haplotype analysis for a 200-kb genomic region in a Korean population Genomics88:535-40 2005
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Lerner-Ellis JP, Gradinger AB, Watkins D, Tirone JC, Villeneuve A, Dobson CM, Montpetit A, Lepage P, Gravel RA, Rosenblatt DS, Mutation and biochemical analysis of patients belonging to the cblB complementation class of vitamin B12-dependent methylmalonic aciduria Molecular genetics and metabolism87:219-25 2005
PubMed ID: 16410054
 
Foster, M., Genetics and social identity after the HapMap. Nature Rev Genet6:1 2005
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Jorde LB, Evolution. Where we're hot, they're not. Science308(5718):60-2 2005
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Kammerer S, Roth RB, Hoyal CR, Reneland R, Marnellos G, Kiechle M, Schwarz-Boeger U, Griffiths LR, Ebner F, Rehbock J, Cantor CR, Nelson MR, Braun A, Association of the NuMA region on chromosome 11q13 with breast cancer susceptibility. Proc Natl Acad Sci U S A102(6):2004-9 2005
PubMed ID: 15684076
 
Klein RJ, Zeiss C, Chew EY, Tsai JY, Sackler RS, Haynes C, Henning AK, SanGiovanni JP, Mane SM, Mayne ST, Bracken MB, Ferris FL, Ott J, Barnstable C, Hoh J, Complement factor H polymorphism in age-related macular degeneration. Science308(5720):385-9 2005
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Qu H, Tessier MC, Hudson TJ, Polychronakos C, Confirmation of the association of the R620W polymorphism in the protein tyrosine phosphatase PTPN22 with type 1 diabetes in a family based study. J Med Genet42(3):266-70 2005
PubMed ID: 15744042
 
Pittman AM, Myers AJ, Abou-Sleiman P, Fung HC, Kaleem M, Marlowe L, Duckworth J, Leung D, Williams D, Kilford L, Thomas N, Morris CM, Dickson D, Wood NW, Hardy J, Lees AJ, de Silva R, Linkage disequilibrium fine mapping and haplotype association analysis of the tau gene in progressive supranuclear palsy and corticobasal degeneration. J Med Genet42(11):837-46 2005
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Di Paola J, Jugessur A, Goldman T, Reiland J, Tallman D, Sayago C, Murray JC, Platelet glycoprotein I(b)alpha and integrin alpha2 beta1 polymorphisms: gene frequencies and linkage disequilibrium in a population diversity panel. J Thromb Haemost3(7):1511-21 2005
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Fan JB, Sklar P, Meta-analysis reveals association between serotonin transporter gene STin2 VNTR polymorphism and schizophrenia. Mol Psychiatry10(10):928-38 2005
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Altshuler D, Brooks LD, Chakravarti A, Collins FS, Daly MJ, Donnelly P; International HapMap Consortium, A haplotype map of the human genome. Nature437(7063):1299-320 2005
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Geisen C, Watzka M, Sittinger K, Steffens M, Daugela L, Seifried E, Muller CR, Wienker TF, Oldenburg J, VKORC1 haplotypes and their impact on the inter-individual and inter-ethnical variability of oral anticoagulation. Thromb Haemost94(4):773-9 2005
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Andrawiss M, First phase of HapMap project already helping drug discovery. Nat Rev Drug Discov4(12):947 2005
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Pandit B, Ahn GS, Hazard SE, Gordon D, Patel SB, A detailed Hapmap of the Sitosterolemia locus spanning 69 kb; differences between Caucasians and African-Americans BMC medical genetics [electronic resource]7:13 2005
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NA18529Female  
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NA18537Female  
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NA18552Female  
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NA18564FemaleCYP2C1919952G>A (Mono)
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NA18564FemaleCYP2C1919952G>A (Mono)
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NA18571Female  
NA18573Female  
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NA18637Male  
NA18940Male  
NA18943MaleCYP2C1919952G>A (Mono)
NA18944Male  
NA18945Male  
NA18948Male  
NA18952Male  
NA18953Male  
NA18959Male  
NA18960Male  
NA18961Male  
NA18965Male  
NA18966Male  
NA18967Male  
NA18970Male  
NA18971Male  
NA18974Male  
NA18990Male  
NA18994Male  
NA18995Male  
NA19000Male  
NA19005Male  
NA19007Male  
NA19012Male  
NA18524Male  
NA18558Male  
NA18561Male  
NA18562Male  
NA18563Male  
NA18572Male  
NA18603Male  
NA18605Male  
NA18608Male  
NA18609Male  
NA18611Male  
NA18612Male  
NA18620Male  
NA18621Male  
NA18622Male  
NA18623Male  
NA18624Male  
NA18632Male  
NA18633Male  
NA18635Male  
NA18636Male  
NA18637Male  
NA18940Male  
NA18943MaleCYP2C1919952G>A (Mono)
NA18944Male  
NA18945Male  
NA18948Male  
NA18952Male  
NA18953Male  
NA18959Male  
NA18960Male  
NA18961Male  
NA18965Male  
NA18966Male  
NA18967Male  
NA18970Male  
NA18971Male  
NA18974Male  
NA18990Male  
NA18994Male  
NA18995Male  
NA19000Male  
NA19005Male  
NA19007Male  
NA19012Male